Silurus meridionalis (southern catfish): 124376961
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Entry
124376961 CDS
T08004
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124376961 (trappc8)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124376961 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
124376961
NCBI-ProteinID:
XP_046692140
LinkDB
All DBs
Position
23:11554503..11583908
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AA seq
1469 aa
AA seq
DB search
MARCAQSVHEFIQDSFVPMVAVLCSDDAERLSRKNNLSFHELLRPFCRLTSEGHLRDPNN
QILVVKGLRISVTEVNTQPAQSTELHGLLGQAVSACQPPEGHAANVITAGDYDLNISERS
VKASVPWYSDWRETFTQLSSSKYYTATTPWFEAYRESFLQSMPASDHEFLNHYVACMLVV
SSHETVPTEQFQKLSQEQHRIQHSGEYAYPKWFIPNTLKYYILLHDVIDGDEKRADSIYE
EMKQRYGTQCCYLLKINSGTGAAGPDEQMPDPWSQYLQKNISSEQYEEAVVNNVEENNIN
SEVDGLHTSDAITDTHPLKLDPTADPGYACNHGEAINSVDTDLSRSQKQTPTSPQAHGVC
LTLNDHDRIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFSATKKWFGGGKVP
EKSIAELKNTAGLLYPPEAPELQIRKMADLCFLVQHYELAYNCYHTAKKDFLSDQAMLYA
AGALEMAAVSAFLQSGAPRPYPAHYMETAIQTYRDVCKNMILAERCSLLSAEVLKSQGKY
SEAAALLIKMTSEDSDLRSALLLEQAAHCFINMRSPMVRKFAFHMILSGHRYSKAGQKRH
ALRCYCQAMQVYKGKGWTLAEDHINFTIGRQSFTLNHPENAIAAFRHILIGDSKQSAVQQ
SAFLREYLYVYRSASQPSNENALPHLPLPCLLCTQTRVFFGHERRLAEGEKQAATHVWLD
QEYDKEQSQLWVELEEQVVAVVNRGSLPISFQPTQYCFSSHTDNLRYPLAVVEEPIVVEV
VFRNPLKVPLALSELSLLWKFTPKVFSGTQGGTIGETISNEKEAASSKATALDDLISTEV
IPEFLMNPEETKVARLKLLPYKTGALHVLGVVYNLGTGEEDNTGEAASPLMCVRGRQDLE
IQGPRLNTTKEEKTSVQHGSDRRLEPIITPPMPLLEVFFINFPTGLLCGEIRKAWVEFIN
VSAVPLAGLRVVSTHPEFFTFGSATSDLTPVTPTAAEHCSAYKTMATPPSVAAVTLVSPA
SFGVTGDDRPAIAEIPLTAGVLGPGEALQIPLWLRGPDREGVHEIHFLFYYESVEKNAKL
SHRVLRHTAFICASRSLSARVTACRSNVLPGEVRNEEKGEERSGSMLVFVDVENINTSEA
GVREFHIVQVSSSSRHWRLHKCINPAGDKDSKLGSRERGKLCFRATRCRTQEATSDSVEK
YTFADLNLGNEQIVSSMTPCADFFFRRGPPSEPRKRVVSQGAASHMRRQSLTPAGRTDHN
LTSVIRKCSEVELDIIVLWKAYVVEDNKQLILEGQLHVALQTIGKEACSLAQKEEAQEMV
LLKFKPDPPPPVGKPSLEQLSHLIKTCLHYPESYDHPFPQKSLCMVPVTLTLSNSSLAQV
DVIIDLRQKTTSPESLEVHGAFTWLGQTQYKLQLRPQEVHQLSLKACFFQAGVYNLGTAR
VFAKLAQSGTLCETSQQTAMPALIIINSV
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtgcgcccagtcggtgcacgagttcatccaggactcgttcgtgcccatggtg
gccgtgttgtgcagcgacgacgccgagagactgagccgcaaaaacaacctgagcttccac
gagctgctgcggcctttctgccggctgacctcggaaggtcacctgcgtgaccccaataac
cagatcttggtggtgaaggggctcaggatcagtgtgaccgaagtgaacactcagccagcg
caatccaccgagcttcatggactcctgggccaggccgtgtcagcctgtcagcctcccgaa
ggccacgctgctaacgtcattactgctggagactacgacctcaacatcagcgaacgctcg
gtcaaagctagcgttccctggtactctgactggagagaaacgttcacccagctcagctcc
tccaaatactatacagcaacaacaccatggtttgaagcatacagggagagttttctacag
tccatgcctgcgtcggatcacgagttccttaaccattatgtggcctgtatgctggtggtg
tcgtctcacgaaaccgtgcccactgagcagtttcagaagctctctcaggagcagcacagg
atccagcacagtggagagtacgcctaccccaaatggttcatccccaacactctgaaatac
tacatcctacttcatgacgtcattgacggcgacgagaagagggcagactccatatatgaa
gagatgaagcagaggtatggtactcagtgctgttacctgttaaagatcaactctggaacc
ggtgctgctgggccagacgagcaaatgccagacccttggagtcagtatctacaaaaaaac
atcagctctgagcagtacgaagaagctgtggtgaataatgtcgaggagaataacattaac
tctgaagtggatggacttcacacctcagatgcaatcaccgatacccatccactaaaactg
gacccgacagctgaccccggttatgcttgcaaccacggcgaggctataaacagtgtggac
acggatctgtcgaggtcccagaaacagacccccacatcaccacaggctcacggagtctgc
ttaaccctcaacgaccatgaccgcatccgccaattcatccaggagttcacctttcgagga
ctgctgccacacattgagaaaaacatccgccagcttaatgatcagttggtgtcaaggaaa
gggttaagtagatctctgttctcagctacgaagaagtggtttggaggtggcaaggtacca
gagaagagcattgctgaactcaaaaacactgcaggacttctataccccccagaagcccct
gagctgcaaattagaaagatggctgacctgtgctttttggttcagcactatgagttggca
tacaactgttaccacaccgccaagaaggacttcctctctgaccaggccatgctgtatgct
gctggagcactggagatggctgccgtatctgcctttctacagagtggagcccccaggccg
taccctgcccactacatggagacggccatccagacatatcgagatgtttgcaaaaacatg
atcttggctgagcgctgttctctactaagtgctgaggtgctgaagagtcagggcaaatac
tcagaagctgcagctcttctcatcaagatgaccagtgaggattcggatctgcggagtgct
ctcttattggagcaggcagctcactgcttcattaatatgcgcagcccaatggtgaggaag
tttgccttccacatgatcctgtcgggccaccgttacagcaaagccgggcagaagagacat
gcattacggtgttactgccaggccatgcaggtttataaagggaagggctggactctcgcc
gaagatcacatcaacttcaccatcggccgacagtcgttcactctgaaccatcccgaaaac
gctatagccgccttccggcacattctcatcggcgacagcaagcagtccgctgtgcagcag
agcgccttcctcagggaatacctgtatgtgtacaggagcgcgagtcagccgtctaacgag
aacgctctgccccatctgcctctgccttgcttactctgcacccagacacgcgtgttcttc
ggccacgaacgccgacttgcagagggggaaaagcaagcagccacccatgtgtggctggac
caggaatacgacaaggaacagtcccagctgtgggtggagctggaagagcaggtagtggct
gtagtaaacaggggtagcctaccaatcagcttccagccgacgcagtactgcttcagcagc
cacaccgataatctgcgctaccctctcgctgtggtggaagagcccattgtcgtggaagtg
gtgttcagaaatcctctaaaggttccactggctttgtctgagctgtctctgctgtggaag
ttcacaccaaaagtcttttctgggactcaaggaggcacgattggagaaaccatctccaat
gaaaaggaggcagcctcaagcaaggccacagcactcgatgaccttatcagcactgaagtc
attccagagttccttatgaatcctgaagaaacaaaagtggctcgcttgaagttgcttcct
tataaaaccggagcgctgcatgtacttggtgtggtgtacaacctgggcacaggagaggag
gacaacactggggaagcagccagtcctttgatgtgtgtccgcgggaggcaggatctggag
atccaggggccgagactgaacacgaccaaagaggagaagacctctgtccaacacggatca
gaccgtcgccttgaacccatcatcactcctccaatgcctctgctggaggtgtttttcatt
aacttccccacgggcctgctgtgcggcgagatcagaaaagcgtgggtggagttcatcaac
gtgagcgccgttcccctcgctggcttgcgggtggtgtccacccacccagagttcttcact
tttggaagtgcgacctctgacctcaccccagtgacccccactgctgccgaacactgctcc
gcttacaaaacgatggccacgccgccgtcagtggccgcagtgactctggtatctcccgcg
tcgttcggcgtgacgggggatgaccggcccgcgatcgctgagattccgttaacggcagga
gttctgggaccaggtgaggcactacagataccactgtggctcagaggacctgaccgcgag
ggcgtgcacgagattcacttcctgttttactacgagagcgtggagaaaaatgcaaagctc
agccaccgggtgctgcggcacacagccttcatctgtgcaagtcgttccctgagcgcgaga
gtgacggcatgccgcagtaacgtgctgccaggagaagtcaggaatgaggaaaagggggag
gagcgcagcggcagcatgctggtgttcgtggatgtggaaaacatcaacactagcgaagca
ggagtgcgcgagttccacatagtgcaggtgtccagcagcagcagacactggaggctacac
aagtgcatcaatcctgctggagacaaagattctaaattgggcagcagggagagggggaag
ctgtgcttcagggcaactagatgcagaacacaggaagctacctcagactcagtagaaaag
tacacttttgctgacctaaaccttggaaatgaacagattgtcagttctatgactccgtgt
gccgacttctttttccggagaggtccgccatccgagccgcggaaaagggtcgtgtctcaa
ggtgcggcctcacacatgaggaggcagagcctcacccctgcgggcaggacggatcacaac
ctgactagtgttatacggaaatgcagtgaagtggaactcgacatcatcgtcctttggaag
gcgtatgttgtggaggacaacaagcagctcattttagagggacaactccacgttgctttg
caaactatcggcaaggaggcgtgctcgctcgcacaaaaagaggaagcacaggagatggtg
ctgctaaagttcaagcctgatcctccacctcctgttggcaaaccctcgctggaacagctt
tctcatctcatcaagacctgtctgcactatcctgagtcctatgaccaccctttcccacag
aaaagtttatgcatggtaccagttaccctgactctctccaacagttccttggctcaggtg
gatgtgatcattgacctgcggcagaaaacgacaagccccgagtcacttgaggtgcatggt
gcgtttacatggttgggacagacccagtacaagctgcagctgaggccacaggaagtccac
cagctctcgctgaaggcctgctttttccaggctggtgtttataacctgggcacggcacgg
gtatttgccaagcttgcccagtcaggcaccttgtgtgagaccagccagcagaccgcgatg
ccagctctcatcatcattaacagtgtgtga
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