Silurus meridionalis (southern catfish): 124377914
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Entry
124377914 CDS
T08004
Name
(RefSeq) ras-related protein Rab-33B
KO
K07920
Ras-related protein Rab-33B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124377914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124377914
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124377914
04031 GTP-binding proteins [BR:
smeo04031
]
124377914
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
124377914
Others
Rab GTPases of specific organelles
Auto phagosome
124377914
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124377914
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
124377914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
SRPRB
G-alpha
MMR_HSR1
ATP_bind_1
RsgA_GTPase
AAA_22
PduV-EutP
AAA_16
Thioredoxin_14
AAA_25
NACHT
Motif
Other DBs
NCBI-GeneID:
124377914
NCBI-ProteinID:
XP_046693249
LinkDB
All DBs
Position
2:8867811..8870593
Genome browser
AA seq
209 aa
AA seq
DB search
MDTCESWIVRRTCKIIVLGDAGVGKTSLTHLYCTGQFPEKTDSTIGVDFRERVVHVGGEK
IKVQLWDTAGQERFRKCMVQHYYRNVHAVVFVYDVTNVSSFRSLPLWMEECQQHLIKLDV
PRVLVANKTDLMTKTAATTIEQARHLAEVHSMPFYLYSTKNGNREQVDAIFNKLVQQICR
QRGKEAEADKSFKLTPKEEEKKEKWSCNC
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggacacgtgtgagtcttggattgtgcgtcgcacctgtaagataatcgtgctgggagac
gccggtgtgggaaagacgagcctcacacacctgtactgcactggacagttccccgaaaaa
accgattccaccatcggagtggacttccgagagagagtggtgcatgtcgggggagagaag
atcaaggtgcagttgtgggacacggcaggtcaggagcgttttcggaaatgcatggtacaa
cactactaccgcaacgtccacgcggtcgtctttgtctacgatgtcacgaacgtgtcttcg
ttccgcagtctgcccctctggatggaggagtgtcagcagcacttgattaaattagatgtc
ccccgtgtgcttgtggctaataagaccgacttgatgaccaagaccgcggccacaaccatc
gaacaagcacggcatttagctgaggtccactcaatgcccttctacctctattcaactaaa
aatggtaacagagagcaggtagatgccatcttcaacaaactggtacagcagatatgtaga
cagcgagggaaagaggccgaggcagacaagagttttaaactgactccaaaagaggaagag
aaaaaggagaaatggagctgcaactgctga
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