Silurus meridionalis (southern catfish): 124378640
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Entry
124378640 CDS
T08004
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03420
Nucleotide excision repair
smeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124378640 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
124378640 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124378640 (cul4a)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124378640 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124378640 (cul4a)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
124378640 (cul4a)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124378640 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
124378640 (cul4a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124378640 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
124378640
NCBI-ProteinID:
XP_046694338
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All DBs
Position
24:14921700..14949535
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AA seq
754 aa
AA seq
DB search
MMAEETRQNRSSGFSALVENSNGVRKTPSSKSGSSKKLVIKNFKDRPRLTETYTEDTWIK
LRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPMLYKQLRQVCEDHVRAQIRQFREDS
LDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRAHIVSD
SAVQSRTVEGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFENRFLTETDRLYAA
EGQRLMFDRDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISAVEKQLLGEHMTGILQK
GLSTLLDENRVTELTLLYLLFSKVKGGLPVLLQFWREYIKSFGGEIVGSPEKDKDMVQEL
LDFKDKMDNVAQGCFQRNEGFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEAT
EEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDVMIQFKQYMQNQSEPSNIDLTVNILTMGYWPTYTPMDVHLPS
EMVKLQEVFKTFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMFNEG
EEFTLEEIQTATGIEESELRRTLQSLACGKARVLNKNPRGKEVEDGDRFNFNNDFKHKLF
RIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKF
PVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgaagagacccgacagaacaggagctccggtttctcagctctggttgaaaac
agtaacggagtgagaaaaactccgagctccaaatccggcagctccaagaaactcgtcatc
aaaaactttaaagacagacccaggctgacggaaacctacaccgaggacacgtggataaag
ttacgcgatgccgtcggcgctatccagaacagcacatcaatcaaatacaacttggaggag
ctttatcaggcagtggaaaatctttgctcttacaaggtctcgcccatgctgtacaaacaa
ctccggcaagtgtgtgaggatcatgtgcgagctcagatccgccagtttcgagaagactct
ctggacagtctttcttttttgaagaggatgaacagatgctggcaagatcactgcagacaa
acaatcatgatccgtagcattttcctctttctggatcgcacatacgtcctccagaactcc
cttcttccctccatatgggacacgggactggagctgtttcgcgcacacattgtaagtgac
agcgcagtccagagtcgtacagttgaagggatattggagcagattgaacgagagaggaat
ggcgagacggtggatcggagtctcctgcgcagcttactgggcatgctctcagacctccag
gtgtacaaggagtcgttcgaaaacaggttcctgaccgagacggatcgtttgtacgcagct
gagggacagagactgatgtttgacagagatgtgcctgaatacctgcaccatgtagcacgg
aggctggaggaggagaacgatcgcgttatcagttacctggatcagagcacacagaaaccc
ctgatctctgcagtagaaaagcagcttctgggggaacacatgactggcattttacagaaa
ggtctcagcacactgttggacgagaaccgtgtgactgagctgacactgctatacctgctc
ttcagcaaagtgaaaggaggcctgcctgtattactgcagttctggagagagtacatcaag
agctttggtggtgagattgttggctctccggaaaaagataaggacatggtgcaggagctg
ctggacttcaaggataaaatggacaacgtggcgcaaggctgcttccagaggaacgagggc
ttcatcaatgccatgaaggaggccttcgaaagctttattaacaaaagacctaacaaacca
gcagagcttattgccaaatacgtcgactccaaactacgcgccggaaacaaagaggccacg
gaggaggagctggagagaatcctcgacaagatcatgatcatcttccgcttcattcacgga
aaagacgtgtttgaagcattctacaaaaaagacctggctaagcgcttgctggtgggcaaa
agtgcctctgtggatgctgagaaatccatgctgtccaaactcaagcatgagtgcggtgca
gccttcaccagcaaactcgaaggcatgtttaaagatatggaactctccaaagatgttatg
atccaattcaaacagtacatgcagaatcagagtgaacccagcaacatcgatctgacggtc
aacatcctaaccatgggctactggcccacctacacccccatggatgtccacctgccctct
gagatggtgaagcttcaggaggtgttcaaaacgttctatcttgggaagcacagtggaaga
aagcttcagtggcagcccacactgggtcacgcggtactaaaagctgagtttaaggagggg
aaaaaggagctgcaggtatctttattccagacccttgttctgctcatgtttaatgaaggg
gaggagtttacactggaggagatccagacagctacaggaatagaggagagcgagctgcga
cgcacgctgcagtccctggcatgcgggaaagctcgagtgcttaataaaaatccccgaggg
aaagaagtggaggacggagaccgcttcaacttcaacaacgacttcaagcataaactcttc
cgcattaagatcaaccagattcagatgaaggagacggtagaggaacaagtgagcaccaca
gaacgggttttccaggacaggcagtaccagatagatgcagcagtcgtgaggatcatgaag
atgagaaagactctcagccacaacctgctagtgtcagaactctacaaccaactcaaattc
cccgtgaagccaggcgacctgaagaagcgcatcgaatccctcattgatcgagactacatg
gagagagacaaggagagccccaaccagtatcactatgtggcctga
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integrated database retrieval system