Silurus meridionalis (southern catfish): 124379498
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Entry
124379498 CDS
T08004
Symbol
ercc6l
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124379498 (ercc6l)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
124379498 (ercc6l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
SWI2_SNF2
AAA_34
Motif
Other DBs
NCBI-GeneID:
124379498
NCBI-ProteinID:
XP_046695822
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All DBs
Position
25:17708045..17716829
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AA seq
1193 aa
AA seq
DB search
MEVTQISKDFNRSLNITDSDSEEKYNRFRQQGKEAAQRGDLELSLGFFRRAFDVRPSDKM
LGRIQRLEEAIKELNISEEEEEFVDVLSSGLMLYKGLYDQLYEHQKDGVAFLYSLHRDGH
VGGILADDMGLGKTVQVISFLSAMYDAELISHTLLVMPTSLIKTWLNEFKRWTPGLRVKE
FHGANKLERSRNLERIQRGSGAIITTYQMLNNNWQQLASFGGREFSWDYIILDEAHKIKS
PSTKTAKSVSAVPSRHRLLLTGTPVQNNLREMWALFDFACKGALLGSAKTFKTEYENPIT
RAREKDATPGEKALGLKISQNLTELIKPYFLRRTKAEVQNRKQLSDRASEEDQQQKVQNQ
QSARVNEIPSLTRKTDLIVWTYLSDVQEDVYRQFVSLDHIKELLTTTHSPLAELTVLKKL
CDHPRLLSARAVAQLGFGAGPGDLQGDDGQSGASSIVGVADETLINESGKLCFLLSLMES
LRDEGKRTLIFSQSRKMLDIIERVLTNRKFCLLRVDGTITQLAERERRIALFQTDARYSV
FLLTTQVGGVGLTLTAANRVVIFDPSWNPATDAQAVDRAYRIGQTHDVIIYRLITCGTVE
EKIYRRQVFKDSLIRQTTGDKKNPFRYFTKQELKELFTLEDTHSSSTQLQLQSLHSSACR
SDPELECHISALKGMNVFGVSRHDLLFSNEEDEDMLQDEDTHYIDQRVQKAQELVQAESQ
LHSLMMDNVSQNTEPTWLRLSRHRYPDQHMGKGDSKTTPPCPNLSSPAVVDLTQSGLDEL
DEGMQVKDDLVIDLSTHVTDDSFVEQEIRSINSEQGLIIEEKSDHLSHSYSNQIINISPL
KQSDLSVALLGMESKTPEAFSQVDLGSPETFFVSDASKVLFKVGIDSSTPPGAELDLTKS
MVGVESNLLSQTSPEYFPGNFNLQLEDSAELLSEDKEETVDQEEEELSTGGEEFQLQMDD
SREQIESNFDRVKENSAVSTLTDESLLWPSKKKRLRVLYDSEEEVEKAVLLSSPLEGSFM
GLGSSTPKSMLRSGFRRSMNTSIASRRSLVESLLDDMEEEEEEVCGGGVCGGGVCGGGVC
GGGVCGGGDFAVVEEEFEEKEEGDGVKGFTDESTDVELAFRIYVHLSEVQSLSLNEVTHP
KEMFDSLVHSGKQCLAEGRKHESLDFFLKAIDINTGDPEIQLLIIQLYRQLSH
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacgcagatcagcaaagatttcaatcggtctttgaatattactgattcagac
agtgaggagaaatataacagatttaggcagcaggggaaggaggccgctcagcgaggtgat
cttgaactttctctgggatttttccgacgagcgtttgatgtgcgtccgagtgataagatg
ctgggtcgaatccagcgattggaggaggctataaaagagctgaacatatctgaggaagag
gaggagtttgtggacgtgctcagcagtgggttaatgttgtataaagggctttacgatcag
ctgtatgagcaccagaaagatggcgtggccttcctgtacagcctgcatagggacgggcat
gtcggcggcatccttgcggacgacatgggtctgggcaagacggtgcaggtcatcagcttc
ctgtcggctatgtatgatgccgagcttatcagtcacacgcttctcgtcatgcccacctcc
ctgatcaagacctggctaaatgaatttaagcgctggacccctggcctgcgagtcaaagag
tttcatggcgccaacaaattggagcgcagccggaacctggaacgaatccagcgtgggagt
ggagccatcatcaccacatatcaaatgctgaataataactggcagcagctggcctcattc
ggaggacgggagttctcctgggattacatcatcctagatgaagcacacaagataaaaagc
ccatcaacgaagactgcgaagagtgtgagcgcagttccgtcacggcaccgcctcctgctc
actggcacacccgttcagaacaacctgcgggagatgtgggccctgtttgactttgcctgc
aagggtgcattgcttggcagtgccaagacctttaaaacagagtatgagaacccaatcaca
cgggcgagggagaaagacgccactcccggagagaaagctcttgggcttaaaatctctcag
aacctgaccgagcttatcaagccctacttcctgcgaaggaccaaagctgaggttcagaac
aggaagcagctttcagacagggccagtgaggaagatcagcaacagaaagtgcagaaccag
cagagtgcaagagtgaatgagatcccatctctaacacgtaagacagatctgatcgtgtgg
acatacctgagtgatgttcaggaggatgtctatagacagtttgtctctctggaccatatc
aaagaactgttgaccaccacacactctccacttgcagagcttactgtgctcaaaaagctc
tgcgatcatcccagactgctctctgcccgagccgttgcccagctcggattcggggcgggg
ccaggggatctccaaggggacgatgggcaatcgggtgcgagcagtattgtgggtgtggct
gatgagacgcttattaatgagtcgggaaagctgtgttttcttctgagcctaatggagagt
ttgagggatgagggaaagcgcacactcattttctcgcagtccaggaagatgctggacatc
attgagcgtgtgcttactaacaggaagttctgtctactgcgtgtagatggcaccatcaca
caactcgctgagagagaaagacgcattgctctcttccagacagatgcacgctactctgtg
tttctgctgaccacacaggtgggtggagtcggcctcaccctcactgctgccaacagggtg
gtgatctttgaccccagctggaaccctgccacagacgcacaggcagtggaccgagcctac
cgtattggccagacacacgacgtcatcatctacagactcatcacctgtggaactgtggag
gagaagatttacaggcgacaggtgtttaaggactctttgatacgccaaaccacaggtgat
aagaagaacccatttaggtacttcactaagcaggagctgaaggagcttttcacactggag
gacacacactcctcttccactcagctgcagctacagtcactccactcgtctgcatgtcgc
tccgaccctgagctggagtgccacatctccgctctaaagggcatgaatgtgtttggcgtg
tcccgtcatgacctgctgttctccaatgaagaggatgaggatatgctgcaggacgaggac
acgcattacattgatcagcgtgttcagaaagcacaggagttagtccaggccgagtcacaa
ctgcacagcctcatgatggacaacgtcagtcagaacacagaacccacctggctccgactg
tcacggcatcgatacccagaccaacacatggggaagggagacagcaaaaccacacccccg
tgccctaatctcagctcacctgctgtggtggatcttacacaatcaggtttggatgaactg
gatgaagggatgcaggtgaaagatgatcttgtgatagatttatccacacacgtgaccgac
gacagttttgttgaacaagagattaggagcataaacagtgagcagggtttgattatagaa
gagaaatccgatcatctttcacactcttactcaaatcagatcataaatatctctccctta
aagcaatctgatttatctgtagctctgctgggaatggagtcaaagacccctgaagcattt
tcacaggtggacttgggttcacctgaaacttttttcgtgtctgatgcctccaaagttttg
tttaaagtggggatagattcatctacacctccaggagcagagctagatttaactaaatct
atggttggggtggagtcaaatcttttaagtcagacatccccagaatatttcccaggtaat
tttaatctgcagctagaggacagtgcagagctgctctcagaggacaaagaggagacggtg
gatcaggaagaggaggagctaagtacaggaggcgaagaattccaactgcagatggatgac
tctagggagcagatcgagagtaactttgaccgtgtgaaggagaactcagcagtctccacg
ctgacagatgagtcgctcctctggccatccaaaaagaaaagattgcgtgtgctttatgat
agtgaggaagaggtggagaaagctgtgttgctcagcagtcctttagagggcagcttcatg
ggccttggatcttccacacccaaatctatgctgcgtagtggcttcagacgcagcatgaac
acatcaatcgcatcacgacgctcactggtagagtcactgctagacgacatggaggaggag
gaggaggaggtgtgcggaggaggagtgtgcggaggaggagtgtgcggaggaggagtgtgc
ggaggaggagtgtgcggaggaggagattttgcagtggtagaggaggagtttgaggagaaa
gaggaaggtgatggagtgaagggtttcactgatgaatccactgatgttgaactggccttt
cgaatttatgtgcacctttctgaagtacaaagtctgagtctaaatgaagttacacatcca
aaggaaatgtttgactcactggtgcattctgggaaacagtgtttggctgaagggaggaaa
catgaatcgttggatttctttctaaaggccattgacattaacactggggaccctgagata
caactactcatcattcaactgtacagacaactgagtcactga
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