Silurus meridionalis (southern catfish): 124379809
Help
Entry
124379809 CDS
T08004
Symbol
rpgrb
Name
(RefSeq) LOW QUALITY PROTEIN: retinitis pigmentosa GTPase regulator b
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124379809 (rpgrb)
Cilium and associated proteins [BR:
smeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124379809 (rpgrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
124379809
NCBI-ProteinID:
XP_046696344
LinkDB
All DBs
Position
26:16269152..16286171
Genome browser
AA seq
1268 aa
AA seq
DB search
MNINVALRCSKRISSVAMAGDTEAEIPETGAVFTFGKSKFADNVPSKFWLKNDVPSKLAC
GDEHTALITEKGKLFMFGSNNWGQLGLGEKISVSVPTCVKALKSEKVKLVACGRTHTLVY
TSCGNLYAAGGNNEGQLGLGDFGERTSFQLVDFFTKRGPIKTLAAGSNTSAAITQDGKLY
VWGDNSEGQIGLGKEEGTSTPRELNVGSRVTWVSCGYYHSAFVTEDGALFTFGERDSGKL
GLSTAQLSDHKAPQRVEGIGERVLQVACGGSHTLALTEKHLYSFGLGQFGQLGHGTFTFE
SHLPRAMEHFRRGRVKHIECGENHSAVLTERGLLYTFGDGRHGKLALGEEYFANQFKPTL
CPRFLEYNVQAVTCGGCHTIVLAKPRLPKSEDVILEEDDVTEDHLEKLLREAESRHGLNR
SLSARDRRRERKRSPEQFGMMFRTLPPLSSAHRNASVPVSSQTFPSQTSKKTTNGFQTNG
IYSSTVHGKTAVENHEDDESVXDLGETADLLNLTHVMKMHPAEKTITFSPVQKKKVKAGE
KHSKVVKQLIHDPEWAGLSSDQAPSSDLRTSHVGESGEPSCRSNRRSAVKESRLVRGPAN
ELRDKSESHPKSKPEPQRQVIDIEPKSKAQIDHKVTVKGAETETEKEVYESEGFKRDDLD
STGSKARPVDKRWRRATEEKKPRKGSARVTRTKKILRTESESKVQVKHKATAVHSKTPDN
TRETWGGSSSSEQSYQAQRTQKTQSTKPERNLDTQKKRLGAGGSSDSVRSGSLAGVASLT
EDLPIESPERPLEDVLSSQFLSRTPEQCPNTVDEQTLSISENPEKTASKRTAVTITVKPV
PAASDEETEKSMSQCQSEDKMDEKRESGRGRIDQVESVGRDDHEERDKESKTEPEEESSS
HVMEERENAEVGKTQQDEVESKMSEQEGSKEMDGRIESQSSNSEGEKGSSKSENICNTKD
DCSEGDKSEDESEEEGAGEEDSSEEESVSVRNEKTEEESGKESETVEDMTGGRNEKEEQE
SGTEEKDSEGKRKKWKVKTERRESDDEEEGKDDTENEGVEESVQENEDAEDKKEEEKRGE
DEDGEAEGDPEENDEIENEEPTALIIFPSNHPQFSDDETTGEEDEEDPEKDDLDEGNDEQ
KEEPVEKMKDGEIQLNAQVKNNVEPVTVPDRPDKDPEDKHISGPLIEEKLQKQNEAKLVK
PKSLFGSNSKISFFLRRSSTKKEKPKAPVEEPSRAEKVSSSDSGDVERGVESSDSQPVRS
SSATCAVL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaatgtggcgctccggtgcagtaagcggattagcagcgtagcgatggctgga
gacacagaggctgaaatacctgaaacgggagccgtgttcacgttcggcaagagtaaattc
gcagacaacgttcccagcaagttctggttaaaaaacgacgtgccgtcaaagctcgcatgt
ggagacgaacacaccgcactgattacagagaaagggaaattgttcatgttcggcagtaat
aactggggacagcttggcctgggcgaaaagatcagtgtgagcgtaccgacttgtgtcaaa
gccttgaaatcggaaaaggtcaagcttgtcgcttgtggaagaactcatacgcttgtttac
acgtcttgcgggaacctatacgcagcaggcgggaataacgaaggacagctcggtcttgga
gactttggggaaagaacttcgttccagctggtggacttctttaccaaacgtggaccaatc
aagacgctcgcagccggttccaacacatcggctgctattacgcaggatgggaagttgtac
gtgtggggcgacaactcggaagggcagatcggcctcggaaaagaggaagggacgtccacg
ccacgtgagcttaacgtggggagtcgggtgacgtgggtttcctgcggttattatcactct
gcttttgtaacagaggacggggcattatttaccttcggagagagagacagtgggaagctg
ggactgtccacagcgcagttgtccgatcacaaagcgcctcagcgcgtggagggcatcggt
gaacgggtgctgcaggtggcatgcgggggaagccacacactggcactcacagagaaacac
ctctattctttcggtctggggcagttcggccagctgggtcacggcaccttcaccttcgag
tcgcatttgccaagagcgatggaacatttccgcaggggaagagtaaagcatatcgaatgt
ggagaaaaccacagcgccgttctcacagagcgaggacttctatacacgtttggagatggc
cgtcacgggaaattggctctaggagaggagtactttgctaaccagttcaaaccgacactc
tgtccacgattcctcgaatacaacgttcaagctgttacctgtggtgggtgtcacacgata
gtgttagccaaacctcggctcccaaagtcagaagatgtgatcctggaggaggacgacgtg
actgaagaccatctagagaagctgctcagggaggcggagtctcgacatggtctgaacagg
agtctgtcagcacgggacagacgcagagagaggaagcgctctcccgaacagtttgggatg
atgttccggactcttccacctctgagttcagctcaccgtaatgcatctgtacctgtttct
agtcagactttcccctcacaaacaagcaagaaaactacaaacggctttcagactaatggg
atttacagcagcaccgtccatgggaagactgcggttgaaaaccatgaggatgatgagagt
gtgnaagatttgggagaaacggccgatttattaaatttaactcacgtaatgaagatgcat
cctgcggagaagacaattactttttctcctgttcagaagaagaaggttaaagctggtgaa
aagcacagtaaggtggtgaagcagcttatacacgaccctgagtgggcggggcttagttca
gaccaagccccgtcttccgatttacggacaagtcacgtcggcgagtccggggaaccgagc
tgccgtagcaatcgaaggagcgctgtgaaggaaagtaggcttgtaaggggtccagctaat
gagcttagagataaatcagagagccatccaaagtctaagcctgaaccgcaaagacaagtc
attgacattgaacctaaaagtaaagcccagatagatcataaggtaacggtaaaaggcgcc
gagacagagactgagaaggaagtttacgaatcggaaggttttaaacgagacgatttggac
tctacaggatccaaagcaaggccagtggacaaaagatggcgacgagccacagaggaaaag
aaaccgagaaagggttctgctcgagtcacacgaacgaaaaaaatcctacgtacagagtct
gaaagcaaagtgcaagtgaaacacaaagctacagctgtgcacagcaaaacaccagacaat
accagggagacatggggtggcagctctagtagtgaacagtcttaccaggcacagaggact
cagaagactcagtccaccaaacccgagcgcaacctggacacacaaaagaaacgtctcggc
gcagggggttcatcggacagtgtaaggtctggctctctcgcgggggtcgcgtcactcacg
gaagacctgcccatcgagagtcctgagcgtcctctggaagacgtcctctccagccagttc
ctgtcccgaactcctgagcagtgtccgaacacagtggacgaacagactctttctatcagt
gagaatccagagaagacagcgagcaaaaggacagcagttactattactgtaaagcctgtc
cctgcagcttcggatgaggagactgagaagagcatgtctcagtgtcagtctgaggacaaa
atggatgagaaaagagagagtggaagaggacgaattgaccaagtggagagtgttggcagg
gatgatcatgaagagcgagataaggagagtaagacagagccggaggaggaatccagcagt
catgttatggaggaaagagagaatgcagaagtaggtaagactcagcaagatgaagtagaa
agcaaaatgagtgagcaagagggtagtaaagaaatggatggacggatagagagccagagc
agtaattcagaaggagagaaagggagttctaaatctgaaaacatttgcaacactaaagat
gattgcagtgagggggacaagagtgaggatgagagtgaggaggagggagcaggcgaagaa
gatagttctgaggaggaaagtgtgtctgtcagaaacgagaagaccgaagaggaaagtgga
aaggaaagcgagacagtggaagacatgacaggaggtaggaatgagaaagaagaacaggag
agtgggacggaagagaaggatagtgaagggaagagaaagaaatggaaagtaaagacggag
aggagagagagtgatgatgaagaagaaggtaaagatgacacagagaatgagggagtagaa
gaatctgtgcaggagaacgaagacgctgaagataaaaaagaggaagagaaaagaggggag
gatgaggatggcgaagcagaaggagacccagaagagaatgacgagattgaaaatgaagag
cccactgccctcatcatcttcccttctaatcatccgcagttcagcgatgacgagaccacc
ggagaagaagacgaagaagaccccgagaaagatgatttggacgagggaaatgatgagcaa
aaggaagagccggtggaaaaaatgaaggatggagagatccagttaaatgctcaggtcaag
aacaatgtggaaccagtcactgttcctgacagaccagacaaagatcctgaggataaacac
atttctggtccacttattgaggagaagctgcaaaagcaaaatgaagccaagctggtgaaa
ccaaagagcttgtttggatccaacagcaagatctcttttttcctgcggaggtcctccacc
aagaaggagaaaccgaaagccccagtggaggaacccagccgcgctgagaaagtctccagc
tctgacagtggtgatgtagaacgcggcgttgaatcgtctgactctcagccggtccggtcc
agctcggccacctgcgctgtgctctga
DBGET
integrated database retrieval system
