Silurus meridionalis (southern catfish): 124379838
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Entry
124379838 CDS
T08004
Symbol
tshz3b
Name
(RefSeq) teashirt homolog 3b
KO
K09236
teashirt
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379838 (tshz3b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124379838 (tshz3b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2_2
zf-C2H2
Zap1_zf1
zf-C2H2_6
zf-met
zf-C2H2_3rep
Homeobox_KN
zf-C2HC_2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
124379838
NCBI-ProteinID:
XP_046696378
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All DBs
Position
26:5222029..5264383
Genome browser
AA seq
1148 aa
AA seq
DB search
MPRRKQQAPRRSAAYVPEELKEAALMDEDVEGDDSAVEEEPAVKYVCQDKDFLLKDRPGF
HDSPTADLSSHEMDSESHLSETSDRMSDFESASIKNEEDITAKEPLTPLNSTTPMKMTAV
APASMDETPNPGPDSLEQMKAIYTSFLTNSYWSSLNMTQPPSEKLPRSHSSSSSSSSSSS
SCGSGGYDWHQSAVAKTLQQVSQNQNRILHPASEPNLFSTVQLYRQSTKLYGSIFTGASK
FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDSEGTKRWSKPRKRSLLEMEGKEDAQK
VLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVTPVAAKIISSARKRAPIELDLPSS
PDSNGGTPKLSLADTSDHLQKTASPYITPNNRYGHQNGASYAWQFESRKSQILKCMECGS
SHDTLQELTAHMMVTGHFIKVTNSAIKKGKPIMEAPANPPLNTMSSSEDKVQSVPLAATA
FSPPPPAPPPPSISPAITAMEIKKEEKEEECTKETTNSNKEKKTTEDEIEEKFDISSKYP
YLTEEDLEESPKGGMDILKSLENTVTSAINKAQNGTPSWGGYPSIHAAYQLPNIMKLSLR
NSGKNSPLKYMFSGEEILSPTKNQPLISPPSCQTSPLPKNNFHAMEELVKKVTEKVAKVE
EKMRDTTARSSPLRRTTPSPCSSEAGESARGDSPKESRGVKTPETNGTVNAHKDSNGEPL
KKEPLENGTDHSVKTPGSSLCSSTAIITDHPPEQPFVNPLSALQSVMNVHLGKAAKPALP
SLDPMSMLFKMSNSLAEKAAVAASTPAQTKKTNEHLDRYFYHINNDQPIDLTKGKSEKSS
SLGSALLSSSISTPSSVSPSSTITMAKASSAVVSFMSNSPLRENALSDISDMLRNLTESH
VSKSSTPTSLSERSDVDGATHDDSEDMSPAQKRKGRQSNWNPQHLLILQAQFASSLRQTS
DGKYIMSDLSPQERMHISRFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDSGHPVFFC
GDCASQIRSPSTYVSHLESHLGFRLRDLAKLSGEQLVNQISRHAKGLSEKLLSAQAHALT
RSIHNSNPSPHSNSHSPSPDEEGSGATYQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLM
YVCELEKP
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaaacagcaggcgccccggcgctcggcagcatatgttccagaggagctc
aaagaagcagctttaatggatgaagatgtagaaggagatgattcagcggtcgaggaggag
cctgccgttaaatacgtgtgccaagacaaggacttccttctcaaagaccgaccaggcttc
cacgactctccgactgcggacctctccagtcatgaaatggacagcgagtcgcacctcagt
gagaccagtgacaggatgtcagactttgagagtgcctcgataaagaacgaggaggatatc
actgccaaggagccacttacaccactcaattcaactacacccatgaagatgacagctgtt
gccccagccagcatggatgaaacgcccaatccaggcccagacagtcttgagcagatgaag
gccatttacaccagctttttgaccaattcttactggtcatcgctgaatatgacacagccc
ccatctgaaaaactaccacgcagccacagcagtagcagcagcagtagcagcagcagcagt
agctgtgggagtgggggctatgactggcaccagtcagctgtcgccaaaacattgcagcaa
gtttcacagaaccagaacagaatactacacccagcttctgagcctaacctcttcagcact
gtacagctgtaccggcaaagcaccaagctctatggctccatctttacaggtgccagcaag
ttccgctgcaaagactgcagcgctgcctacgatacacttgttgagcttaccgtgcacatg
aatgaaacaggccattaccgagacgacaaccatgagacagacagtgagggcactaagcgc
tggtccaagccacgcaagcgttccttgctagagatggaaggcaaggaggatgctcagaaa
gtactcaaatgtatgtactgtggccactcctttgagtcactacaagatctaagtgtccat
atgatcaaaacgaaacactaccaaaaagtacctctcaaggagcctgtgacacctgtggca
gccaagatcatctcgtctgctcggaaaagagcccctattgagctggatctgcccagctcc
ccagactctaatggaggaacacctaaactctctcttgcagacaccagtgaccacttgcag
aagacggcaagtccctacatcacgcctaataatcgttatgggcatcagaatggtgctagc
tatgcatggcagtttgaatctcgaaaatcccagatcctgaaatgcatggaatgtggaagt
tcccatgatacccttcaagagctaacagctcacatgatggttactggacacttcattaag
gttactaactctgccataaagaaaggcaagcctattatggaggcaccagccaacccacct
cttaacaccatgtcttctagtgaagataaagtgcagtcggtgccactggctgcaacagct
ttttccccacctccccctgcaccccctccacccagcatatcccctgcaataactgctatg
gaaattaaaaaggaagaaaaagaagaagagtgcacaaaagagaccactaatagcaacaaa
gagaagaaaacaacagaagatgaaattgaggaaaagtttgacatttcctccaagtatcca
tatctgactgaggaagatctggaggagagccctaaaggtggaatggatattctcaaatca
ctggaaaacacagttacatctgccattaacaaagcacagaatggaacacccagctgggga
ggataccccagcattcatgctgcttaccagctcccgaatatcatgaaactttccttgcga
aactcaggaaagaactccccactaaagtacatgttctcgggtgaagagatcctgtcccca
accaaaaatcaacctcttatctctcctccaagctgccagacctcacctctacccaaaaat
aatttccacgccatggaggaacttgttaagaaagtaacagaaaaagtggccaaagtagag
gagaaaatgagggacacaactgcacgatcttcccctttaaggcgaaccacaccctctcct
tgcagtagtgaagctggtgagtctgcccgaggggactcacccaaagaaagcagaggagtc
aaaaccccagagaccaacgggacagtaaatgctcacaaggactctaatggcgagcctctc
aaaaaagagccattagaaaatggcactgaccattctgtcaaaactccaggctcatctctg
tgcagcagcactgcaattataacagaccatcccccagaacagccatttgtcaacccctta
agtgcgcttcagtctgtcatgaatgtccacctaggtaaagctgctaaacctgctctcccc
tctctggaccccatgagcatgctctttaaaatgagcaacagtctagctgagaaggcagct
gttgctgcctccactccagctcagaccaaaaagacaaacgagcatcttgaccgttacttc
taccacatcaataatgaccagcccattgacctgactaaaggcaaaagtgaaaagagcagc
tccctgggatcagctttattgtcctcctcgatatcaactccttcctcagtgtcaccttct
tcaaccataacaatggccaaggcatcatctgctgtggtgtcgttcatgtcaaattcaccg
ctgcgtgaaaatgcgctgtctgacatttccgatatgcttcgcaacttaacggaaagtcat
gtctccaaatcgtccactccaaccagtctatctgagcgatcagatgtagatggtgctaca
cacgatgactctgaagacatgtcaccagcccagaagcgcaagggtcggcagtccaactgg
aaccctcagcacctacttatcctgcaagcccagttcgcctccagcttgagacaaacgagt
gatggcaaatatatcatgtctgacctcagcccacaggaacgcatgcatatctctcgcttc
actggcctttcaatgactaccataagccactggctggccaacgtcaagtaccagttgagg
cggacaggtggcacaaagttcttgaagaaccttgattctggccatcctgtgttcttttgt
ggtgactgcgcttcgcagatacgctccccttccacctacgtcagccatcttgaatcgcat
ctgggatttcgtctaagagacctggctaaattatccggggagcagctcgtcaaccagata
tcacgtcacgcgaaggggctttctgaaaaactgctgtcagcgcaagcccacgccttgacc
cgttctatccataattcaaacccaagtccgcactccaactcccactccccttccccagac
gaggaaggcagtggcgccacatatcagtgtaaactgtgcaatcggacttttgctagcaag
cacgctgttaaactccatctgagcaagactcatggcaaatctcccgaggaccaccttatg
tatgtctgtgaacttgagaaaccttag
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