Silurus meridionalis (southern catfish): 124380147
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Entry
124380147 CDS
T08004
Symbol
tsg101b
Name
(RefSeq) tumor susceptibility gene 101 protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124380147 (tsg101b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124380147 (tsg101b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124380147 (tsg101b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380147 (tsg101b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124380147 (tsg101b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124380147 (tsg101b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF3450
CENP-F_leu_zip
RasGAP_C
DUF5685
Laminin_II
Exonuc_VII_L
Prominin
DUF724
EMP24_GP25L
APG6_N
CCDC22_CC
FUT8_N_cat
FapA
TACC_C
CCDC90-like
TMPIT
Motif
Other DBs
NCBI-GeneID:
124380147
NCBI-ProteinID:
XP_046696895
LinkDB
All DBs
Position
26:3303384..3311314
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AA seq
389 aa
AA seq
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MAVNEVALRKMLAKSYKYRDSTLREITNVMNHYKDLKPVMDIYVFNDGSNRELLSLTGTV
PVSFKGTVYNIPICLWLLDTYPYNPPISFVKPTSSMMIKTGKHVDANGKVYLPYLHEWKH
PESDLFGLIQVMIVVFGEEPPVFARPTTQNAYPGFQPAGPPNAAYLPNTPSTPFGQSYSP
NPGGFQGYPFPAATSGYPATPGTQYYTPTTTGGPARDATIGEDTIRASLVSAVSDKLRWR
MKEEMDRSQAELDALKRTEEDLKKGHQKLEEMVSKLDQEISDVDKNVELLKKKDEELTAA
LEKMEQQSENSDIDELIVPTAPLYRQILSLYAEENAIEDTIFYLGEALRRDVIDLDVFLK
HVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaatgaagttgctctgcggaaaatgctggctaagagttataaatacagagac
tcgaccctgagggagatcactaatgtgatgaaccactacaaagacctaaagcctgtaatg
gacatttatgtgttcaacgatggcagcaacagagagttactgagtcttacagggactgta
ccagtgagctttaaaggaaccgtgtacaacattcctatttgcctgtggctgctggacacg
tacccgtacaatcctccaatcagcttcgtcaaacccactagttccatgatgatcaaaaca
gggaagcacgtcgatgccaacgggaaagtctacctcccgtatttgcatgaatggaagcac
cccgagtcagatttgtttgggttgatccaggtgatgatcgtggtttttggagaagagcca
ccagtttttgcccgtcccaccacacagaacgcgtacccaggattccaacctgctggtcct
cctaatgccgcttacttgccaaacacaccgagcacaccatttggccagagttactctcct
aacccgggagggtttcagggttatccgttccctgctgctacatctggatacccagccaca
cctggaacacaatactatactcctaccaccactggaggtccggctcgtgacgcgaccatc
ggcgaggacacgatccgtgcctctctggtgtctgcagtaagcgataagctgcgttggagg
atgaaggaggagatggaccgctcccaggccgaacttgacgctctcaagaggaccgaggag
gacctaaaaaagggacaccaaaagctggaggagatggtgtccaaactggaccaggagata
tctgatgtagacaaaaacgtggagctgctgaagaagaaggatgaggagctcacagctgct
ctggaaaaaatggaacagcagtcagagaacagcgacatcgacgagctcatcgttcccaca
gcaccgctctaccgccaaattctgagcctatatgccgaggagaacgccatcgaagacact
atcttctacctgggagaggcgctacgcagagacgtcatcgacttggacgtcttcctcaag
cacgtcagacttctctcacggaagcagttccagttgcgggctttgatgcagaaagccaga
aaaaccgcaggcctcagcgacctctactga
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