Silurus meridionalis (southern catfish): 124384207
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Entry
124384207 CDS
T08004
Name
(RefSeq) transcription factor HIVEP3
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124384207
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124384207
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_4
zf-H2C2_5
NOA36
DUF6255
zf-met
Motif
Other DBs
NCBI-GeneID:
124384207
NCBI-ProteinID:
XP_046702828
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All DBs
Position
4:24630688..24683144
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AA seq
1965 aa
AA seq
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MEAEHSQPSDGERSGGRQQSLSESSHRGTFAQTQEQATSVPIHGSHGRHHRRQPKRRDLL
QRQQQQQSQMGEAWHLQDVPGPSGGSYTSSSLESSTQVPHLQGVPSCPSQEFQEGTTSRR
ERKPQKPGKYVCSYCGRPCAKPSVLQKHIRSHTGERPYPCVPCSFSFKTKSNLYKHRKSH
AHRIKASLASRCEESSCSGIEIGAVGDEQEEATEADSTESEDETGQHQPSTSQERPALRK
SSKVEISFSEEGPRTEDSQAIKQRLAMRLSERKRAPIESPDESPSSSLGPGSKGSTESGY
FSSYGSAELSQVSPPNANVKSYAEIILGKYGRLGQQQRLPHQHFQTSSPSSSLGHEEKSI
HFSVPKTQLIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSVESAKFSSPKDPKEDF
PGTSGTTGQILDIQHSRLCEGTLSTYCPSGVLLRSQSVPSTSGKDDSPSSSSHSFRLSQS
FDEQQAASAELRVGHHHRMLKRQPAIEMPVGADLGAEAGSSVSTESGWKQQKGVYECEVC
GTQLRKQDNYEAHRVSCMNKASQEHQSEKKVPAEQEDHRQIMHYKFKAMAMAIRKRRKEE
SLEEDPPSPGPAAISFSSHLATSAIGSKDDFQGLPGTVPQTEPEKIGPYKEISVIQHTSS
FEKQESMSIEIPEPELEHKESQEPKQPSTSRLVRQPKIQVPEIFVTKEPDTEMLSPPASS
YIPKELEKEEFQWPQRSQSLAQLPAEKLPPKKKRLRLAEAPQSSGESSFESLSLPRSPSQ
ESNVSHTSSRSTSFDETGKVEPETQAGQWSSQGSHMLTVPGAYQHHHREMHRSASEQAPA
SPPHPAQIVETRSKSFDCGSLSLRPASSSWKERRKCLLVKHATLEKQDQEESSSTIHHSF
PGHSALTVGELRASSTSRLSPESLGKTLQLFQTPLPTTVYPYTSPETFSSQQITGLQPVR
TISEVLSSHMLQQALIQSVPSSFYPRQLNLAEHLGLPVQPFPNLLSLQYPTSSLIIQDPM
ASPIGRSSSPPSSTHKRGSPFQHLVARHQPRPIIATCLEQLTPVVSLVVPVRLQTHIPTY
ASAMYTTISQILATTRSQQPICCTAMVIMEKLECTKLQRSFLGLPSPTLKTCIPLSLPLE
FQTEAASGDGCWPLCAGGSKRMLSPAGSLELSLEAQRQQKRIKEEEEVEESGEECKTRGK
FPEDHQGTNKKGQRDRKGVEVAVEIEQEQEEKKTDFDGNKPEISQVETGLKKEEMQEEGH
RCVSVVEIPERSTGYTDPLYPSLHTSTSVSWCYLNYTKPNPSPHTNPQTSVYSSWSVSMY
NPNLPGLSTKIVLSLLCSKQMYSSGVYTIASTTSPTTDKLVDKKTPRVSEVHAKSLSTPA
KEKDEPLNKRVEQDVRSKEGTASTSKHSEPLRVCIFEGGYKSNEEYVYVRGRGRGKYVCG
ECGIRCKKPSMLKKHIRTHTDIRPYVCKHCNFAFKTKGNLTKHMKSKAHGKKCLEKGVSE
SSVDELETEEPGTSEGQVYESEDQEEHQFSDIEDSEDEDDEENEEEEDESSHEDAPSSCS
TDTHQSDSGPGSLTGPTSLSVSEREEREKQLSPVQPWTGESKRALFSSKAWEHSPLAFSS
ASEGSPLRSVSPRLELSSPCRHLSPSPERGPSPLTASPLRSFSPLRPLSPARYRSSRAQI
SPTPFRTQHRAHSSPGHFHWEPSNKPRESQQQQERPSTPSNAQASQRLSSPHTSLVPSAL
QFTQTEPPTHVPIPSRTIDRMFSHLPLHSQQQARMPYHMIPIGGIQMVQLRPRSCPKLER
ASSSTQSPSSPKEEFTFSQSKSSWSTLWNLQSETSQSVSGTQILERETRQLGLHCPVMSF
TTAKSSPTYDSGKDNTKDRKQYGSSWPSKTRTSVPKTSQEGGQDTIEGDKRSSDVSEKES
MASLHRKGEQSEPEVPKDGQSLNDPTTEEKSVYSVQSQNSTPDST
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagcatagccagccgtctgatggggaacgatctggtggacgacagcaatct
ctgtctgaatcttcacacaggggtacatttgctcagacacaggaacaggctacctctgta
ccaatccatggatcacatggccggcatcacagaaggcagccaaaacggcgtgatttgctc
cagaggcagcagcaacagcagtctcagatgggggaagcttggcatttacaagatgttcca
ggcccctctggcggcagctacacttcttcatctcttgaatcctctacccaagtccctcac
cttcagggtgttccatcttgccccagtcaggaattccaagaaggcaccacatctagaagg
gagcgaaagccccaaaagccagggaagtatgtgtgctcatactgtggaaggccatgtgca
aaacccagtgtcctccaaaaacatatccgttcccacacaggagaaagaccctatccttgt
gtcccttgtagtttttcatttaagactaaaagtaacctgtacaaacatcgtaaatcccac
gcccatcgaataaaagccagcttggcatctagatgtgaagaatccagttgcagtggaatt
gaaattggtgcagtaggagatgaacaggaagaagcaacagaagcagatagcacagagagt
gaagatgaaactggtcagcatcagccatccacttctcaagaaaggccagctctaagaaaa
agctccaaggtcgaaatttccttttcagaagaagggccaagaacagaggactcccaggca
atcaagcagaggttggctatgcgactcagtgaaaggaaaagagctcccattgaatcacca
gatgagagcccatcatcttcattgggtccgggtagtaagggcagtaccgaatcgggttac
ttctctagctacggcagtgctgaattatctcaagtaagccccccaaacgccaatgttaaa
tcctatgctgaaattatattaggaaagtatggacgattaggccagcaacaaagacttcca
caccaacattttcagacatcatcaccgtcatcatctttgggacatgaggaaaaatccatc
cacttcagcgtgcctaagacacaactcattgaacatattacgaaattaataactataaat
gaagctgtagttgacacgagtgaaattgacagtgtcaaacctagacgttcttccctttct
aggagaagcagtgttgaatctgctaaattttcttcaccaaaagatccaaaggaagatttc
cctggcactagtggcactaccgggcaaattcttgacatacagcattctcggttatgtgaa
ggcacactttctacctattgtcccagtggtgttctattaagaagccagtcagttccatcc
actagtggcaaagatgattcaccgagctcatcttcgcacagctttcgtctcagccagtct
tttgatgagcagcaggctgcatcagcggagctgagggttggccaccatcatcgaatgtta
aaacgccagcctgccattgaaatgccagttggagctgaccttggagcagaagctggctcc
tcagtttccacagaatcaggatggaagcaacaaaagggagtttatgagtgtgaggtatgc
ggaactcaattgagaaaacaggacaattatgaagcacacagagtttcttgtatgaataaa
gcttcacaggaacaccagagtgagaagaaggtgcctgctgaacaagaagatcatcgacaa
ataatgcactataagtttaaagcaatggctatggctatacgaaagaggaggaaagaagaa
agtctagaggaagacccccctagcccaggtccagcagctatatcctttagcagccatctt
gccacatcagcaatagggagtaaagatgattttcagggtttgccaggcactgtaccacaa
actgaaccagaaaaaatcggcccttacaaagaaatatcagtaatccaacacactagttcc
ttcgaaaagcaagaaagcatgtctatagaaatcccagagcctgagcttgaacataaagaa
tcacaggagcccaagcagccctccacatccaggttagttcggcagcccaagattcaagtg
ccagagatctttgtgacaaaagaaccagatactgagatgctttcaccaccagcaagttcc
tatatcccgaaagaattagagaaggaggagttccagtggcctcagcgaagtcaaagtctg
gctcagctccctgcagaaaagctgccaccgaaaaagaaacgtctccgtttggcagaggca
ccacagtcatcaggagaatctagctttgaatcactatccctaccacgcagtccaagccaa
gagagcaatgtttctcacacctctagtcgatctacatcttttgatgaaacaggaaaggtt
gaacctgaaacgcaggctggtcaatggagctcccaagggtcccacatgctcaccgtacca
ggtgcataccaacatcatcacagggaaatgcatcgctctgcctctgagcaggctcctgca
agtccaccacaccccgcccagatagtagagacaaggagcaagtcatttgactgtgggtcc
ttgtctctaagaccagcttcttcttcttggaaagagaggcgaaaatgtctcttagtgaaa
catgcaactcttgagaaacaggatcaggaagaatcatcatctaccatccatcattccttt
cctggccattctgcccttacagttggtgagctcagagcaagcagtacttctagacttagc
ccagaatctttgggcaaaactctgcagctctttcaaactcctcttccgactacagtttac
ccttacactagtccagaaaccttctcctcacaacagataactggacttcaacccgtcaga
actatatcggaggtcctatctagtcatatgcttcagcaggctctcatacaatcagtgcca
tcttcattttatccaagacagcttaatttagctgagcaccttggccttcctgttcagcct
tttcctaatttgctttcactacagtacccaacaagtagtctaataattcaggatcccatg
gcttcacctattggcagatctagttctcctccttcctctacccataaaagaggctcacca
tttcagcatcttgtcgctcggcatcagcctcgtcccatcattgctacttgccttgagcag
cttacaccagtggtgtcactggtggtgcctgtgcgcctacagactcacattcctacttac
gctagtgccatgtacacaaccatttcccaaattttagccacaacacggtctcagcaacca
atttgctgtacagccatggtcatcatggagaagcttgagtgcactaagcttcagagatct
ttccttgggcttcctagtcctactctgaagacctgcattcctttatcccttcctttagaa
tttcaaacagaagctgcatctggtgatggttgttggccactttgtgctggcggaagtaag
cgtatgctttcccctgcaggtagtttagaactcagcttagaggcacaacggcaacagaaa
cgaatcaaggaggaagaggaagtagaagaaagtggagaagaatgtaaaactcgtgggaaa
tttccagaggaccaccaaggaacaaacaagaaggggcaaagggacagaaaaggagtagag
gtagctgtagaaatagagcaagagcaggaagaaaagaaaaccgactttgacgggaataag
ccagagatttcccaggtggaaactggacttaaaaaagaggaaatgcaggaggagggccac
cgatgtgtatcagtggttgagattccagagagatctacaggttatactgaccccttatac
cccagtctccacactagtacatcagtgagctggtgctacctgaattatactaagcctaac
ccatctccccacacaaatccacagacgtctgtgtattcctcttggagtgttagcatgtac
aaccccaatcttcctggtctgtccacaaaaatagtattgtcactgttgtgttctaagcaa
atgtacagttctggggtatacactatcgcttcaacaacatctccgacaactgacaagctg
gttgacaaaaaaacacccagggtatcagaggtacatgccaaatcattgagcactcctgcc
aaagagaaagacgagcctctaaataagagggtggaacaagacgtgagaagtaaagaggga
accgcttccacctcgaagcacagtgagccactacgtgtttgcatctttgagggagggtat
aagtctaatgaagagtatgtatatgtaagaggaagagggagagggaagtatgtatgtggt
gagtgtgggattcgctgtaaaaagcccagcatgctgaagaaacacatccgcactcacaca
gatattcgtccctacgtctgtaagcactgcaactttgccttcaaaactaaagggaacctc
acgaaacacatgaaatcgaaggcacatggtaagaaatgcctggagaagggtgtgtccgaa
tcatctgtagatgagctggagactgaagaaccagggaccagtgaggggcaagtctatgag
tcagaggatcaggaagagcaccagttctcggacattgaagactcggaagatgaggatgat
gaagaaaacgaggaggaagaggatgagtcctcccatgaagacgctccttcatcctgctct
acagatacccaccagtcagacagtggtccaggctcactgacaggtcccacaagcctttct
gtttcagagagagaagaaagagaaaagcagctctctcctgtccaaccatggacaggagaa
agcaaacgagcactgttctcctctaaagcctgggagcattctcctctagccttctcttcc
gctagtgaaggatctcctctccgcagtgtctcccccagactggaactgtcgtctccctgt
cgacatctgtccccatcccctgaaagaggcccgtctcctctcacagcgtccccactcagg
tcgttctctccactgcggcctctttctcctgctcgctacaggagctccagagcccaaatc
tctccaacaccattcagaactcaacatagagcccacagttctcctgggcacttccactgg
gaaccaagcaacaagcccagagagagccagcagcagcaggagaggcctagtacacctagt
aatgcgcaggcgtcacagaggttgagctctccacataccagcctggtgccctctgcccta
caattcactcaaactgagcctcctacccacgtaccaatcccctcaagaactattgaccgc
atgttcagccacctccccttacactcacagcaacaggcccgcatgccttaccatatgatc
ccaattggaggaatccagatggtgcagcttaggcccagatcctgccccaaactggagcgc
gcttcctcttctacccaatcccccagctctcccaaagaggagtttacgttctcccaaagc
aagagctcatggagcacgttatggaacttgcaatctgaaacaagtcagagtgttagcggg
acacagatcctggagcgggaaaccaggcaattagggttacactgtcctgtgatgagcttt
acgacagccaaatcctctccaacatatgactctggcaaggataacacgaaagaccgcaaa
caatatggcagctcatggccctctaagactcgtacctctgttcccaagacatctcaagaa
gggggccaagataccattgaaggggacaagaggagctctgatgtctctgagaaggaatcc
atggcctccttacacagaaaaggtgaacaatcagagccagaggtgcctaaagacggccag
tcattaaatgacccaactacagaagagaaatctgtctactctgtacagagccagaatagc
accccagacagcacttaa
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integrated database retrieval system
