Silurus meridionalis (southern catfish): 124384691
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Entry
124384691 CDS
T08004
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124384691 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124384691 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124384691 (usp13)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124384691 (usp13)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124384691 (usp13)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124384691 (usp13)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124384691 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
Motif
Other DBs
NCBI-GeneID:
124384691
NCBI-ProteinID:
XP_046703676
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All DBs
Position
1:24619212..24646598
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AA seq
859 aa
AA seq
DB search
MATDLGELLVPFMPTIRVPRSGDRVYKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKPTGAAGGALPRRRNGKVFLDLELNRDFNGDDYEFEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAVLNAASAYKKQEQDSWEEELQVSKHARSLRQQE
NTVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETKFPLAVK
LDTITPDGADVYSFDEEEAVLDPLIAEHLTHFGIDMLKMQRTENGHHTDNHVQPRATEWE
VIQESGFKLKAVYGSGYTGIRNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPVKSELIEQVMKEDYKQQNRGISPRMFKALISKGHP
EFSSNRQQDAQEFFLHFVNLVERNSAGTENPSDVFRFIVEERVQCCQSQKVRYTQRVDYL
MQLPVPIEAAINREEIMAYAAKRKDAEENMHTPPDPVRARVPFTACLQAFNEPENVLDFW
SSALQAKSAGVKTSRFGTFPDYMVVQLKKFTFGVDWVPKKLDVSVEMPDFMDLNRLRATG
LQAGEEELPDFTPPIVIPEDTRDSSVNNSLESPEIDEASVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEADLPSASFPTASPLDNQPPEESISILTS
MGFPRHHTVRALKATNNNLERALDWIFTHPESEEDSEAMSDMADTEPNDTSFSNANTHSD
STLSPEQEMSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDNRVCLS
ERPPKDLGYIYFYRRLPSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggccacggatctgggagagctgttggtaccgttcatgcccaccatacgggtgccgagg
tcgggagacagggtgtacaagagcgagtgcgccttttcatacgactctccggagtcagaa
ggtgggttgtatgtgtgtatgaacacattcctgggttttggaagagaacacgtggagaga
cattaccgtaaaactggacagagtgtgtacatgcacttaaaacgtcatgtgaaggagaaa
cccacaggtgctgctgggggtgccttgccaagaagacggaacggaaaagtattcttagat
ttagaacttaaccgtgactttaacggggatgattatgaatttgaagatgaagccaagctt
gtcatattcccagaccactatgagatccctttaccaaatatcgaggagttgcctgccctg
gttacaattgcttgtgatgctgtactcaatgctgcatctgcatacaaaaagcaagagcaa
gattcatgggaagaggagcttcaagtgtccaagcatgccagaagtctcagacaacaagag
aacacggttcggattcctcccagtggctggaagtgtgccaagtgtgaaatgcgagagaac
ctgtggctgaaccttacagatggctctgtcctctgtgggaaatggttcttcgatggaagc
ggagggaacggtcatgccctcgaacactacaaagaaaccaaatttccactagcagtcaag
ctcgacaccatcaccccagatggagcagatgtttactcttttgatgaagaagaggcagta
cttgaccccctcatagcagaacacttgacacactttggaatagacatgctaaagatgcaa
aggacagaaaatggccaccacacagacaaccacgtacagcctcgagccactgagtgggag
gtgattcaggaatctggctttaagctgaaggcagtgtatgggtcagggtacacaggcatc
agaaacctgggaaacagctgctacctcagcaccactatgcaagtgctcttcagcatccct
gagttccagagagcatacgtcggaaatctacagagaattttcgactactcaccccttgat
ccaacccaagatttcagcacacaaatggcaaaactgggtcatgggttactgtcaggccag
tattccaaaccaccagtcaaatcagaactcattgaacaggtgatgaaagaagattacaag
caacaaaacagaggtatttctcccagaatgttcaaggctctaatcagcaagggtcaccca
gagttctcctcaaacagacagcaggatgcccaagaattctttttgcattttgttaatctg
gttgagaggaatagcgctggcacagagaaccccagtgatgtgtttcgcttcattgtggag
gagcgtgttcagtgctgccagtcgcagaaagtgcgatatacacaaagagtggactacctt
atgcagcttcctgtgcccatagaggccgccatcaacagagaagaaataatggcatatgcg
gcgaagcgcaaggatgcagaagaaaacatgcatactcctccggatccagtgagggcccgc
gttcccttcactgcctgtctacaagcctttaatgaacccgaaaatgttctggacttctgg
agctcggcgctacaggccaagtcggctggagtgaagacttctcggtttggaacttttcct
gactacatggttgtacagctcaaaaagttcacatttggagtggactgggttccaaaaaag
ttagatgtttctgtagaaatgcctgactttatggacttaaatcggcttcgggctacagga
ttacaagcaggtgaagaagagcttcctgactttacgcctcctattgtcattcctgaggac
acaagggacagctcagtgaataattctttggaatctccggaaatagacgaggcctctgtg
atgcagttggcagaaatgggcttccctctggaggcctgccggaaggccgtgtactacact
gggaacatgggagctgaaatggcctttaattggatcattgctcatatggaggagccagac
tttgcagagccccttgcaattccatcatacatggaagcagatctccccagtgccagcttt
cctactgccagccctctggacaaccagcctcctgaggaaagcatctctattctcacctcc
atgggtttccccagacatcacactgtacgagccctaaaggcaacgaataacaacctggag
cgggcattagattggatatttactcacccagagagcgaggaagacagtgaggccatgtcc
gacatggccgacacagagcccaatgataccagtttctcaaatgctaacacgcatagtgac
tccacgctgtccccggagcaagaaatgtctagtccacgtgttcgagatggccctggacgg
tatgaactctttgccttcataagtcacatgggaacatcaacaatgtctggccattatgta
tgtcatatcaaaaaggaaggaagatgggtcatttacaatgataatagagtatgcttgtca
gaaaggcctccgaaagacttggggtacatttacttttaccggcgcctgcctagctgctag
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