Silurus meridionalis (southern catfish): 124385326
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Entry
124385326 CDS
T08004
Symbol
sntg1
Name
(RefSeq) gamma-1-syntrophin
KO
K24065
gamma-syntrophin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124385326 (sntg1)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
124385326 (sntg1)
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GFIT
Motif
Pfam:
PDZ
PH
PDZ_6
PH_17
DUF1462
Motif
Other DBs
NCBI-GeneID:
124385326
NCBI-ProteinID:
XP_046704561
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Position
4:complement(8106659..8125038)
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AA seq
525 aa
AA seq
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MDFKTSKEETKTGIFLLQDGNEEPFNIRLHLSKDILTIQEQDVICVSGEPFYSSERTVTI
RRQTIGGFGLSIKGGAEHKIPIVISKISKEQKAELSGLLFIGDGILQINGINVRSYRHEE
VVQVLRNAGEEVTLTVSFLKRTPAFLKLSLCEDCTCVPSDHSSGTSSPLCDSGLHLNYHP
NNTDTLSCSSWPMSPALRWEKRWVDLRLIPLLHARLSKYIPGSDICRENAFQVIAVDGVC
SGIIQCPSAEECTDWLQAIASNISALTKHNVKKINRNFPVNQQIIYMGWVDEKEQDSVQD
RMYTPKFLALRGSSLFKFSAPPVTTWDWTRAEQSFTIYEIMCKILKDSELLDKRRQCFSV
QMDTGEDTVFSVELESDLLLWEKAFQMATFLEVERIQSKTYACITESHLMGLTIDFSMGF
VCFDAASKVVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKLIEAKELEFSNLFAVLHCIH
AFFAAKVACLDPMFVGSPNSAAATSGPTLTSVTSLGQASRLKYLN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaagacttcgaaagaagagacaaagacggggatttttctactgcaagatggt
aacgaagagcccttcaacatccgacttcacttgtccaaagacattctaaccatacaagag
caagacgtcatttgcgtctctggggaaccgttctactccagcgaaaggactgtaacaata
cgacggcagacgattgggggatttgggttaagtataaagggcggcgcggaacacaagatc
ccgatcgtgatttcgaaaatatcaaaagagcagaaggccgaactctcgggtcttctgttc
ataggagatggaattctccagataaacgggatcaacgtcagaagttatcggcatgaagaa
gttgttcaggtgctacggaatgcgggggaagaagtaactctgaccgtgtcttttctgaaa
aggacgcctgcctttttaaagctgtcgctctgtgaagactgcacatgtgtaccgagtgac
cacagcagtgggacatcatctccgctgtgtgacagtggcctccatctgaactatcacccg
aacaacacggacacgttgtcttgctcgtcttggcccatgtccccggcactgcgctgggag
aagcgatgggtggatctacgcctcatccctctcctccatgctcgtctttcaaagtacatc
cctggctctgatatctgcagggaaaatgcgtttcaggtcatcgccgtagacggggtctgc
agcggaatcattcagtgtcctagtgctgaagaatgcaccgactggcttcaagcaatagca
tccaatatatctgctctcacaaagcacaatgtgaagaagattaacagaaactttcctgtg
aatcagcagattatttacatgggctgggtggacgagaaggagcaggactcggttcaggat
cgcatgtacactccgaagttcctggcattacggggttcctcccttttcaaattctcagcg
cctccagtaacgacttgggactggacccgggcggaacaaagctttaccatctatgagatc
atgtgcaagatcctaaaggacagcgagctgctggacaagcgacggcagtgtttcagcgtg
cagatggacacaggcgaggacacggtgttcagcgtagagctggagagtgacctgctgctc
tgggagaaggccttccagatggccacttttctcgaggtggaaagaatacagagcaaaacg
tacgcctgcattaccgagagccacctgatggggcttaccattgacttcagcatgggcttc
gtgtgcttcgatgcggcatcaaaggttgtgctgtggaggtacaagttctctcagctcaaa
ggctcctcagacgatggcaagagtaagatcaagtttctcttccagaacccagacacgaag
ctcatcgaagcaaaggagctggaattctccaacctgttcgccgtgcttcactgcatccat
gcgttcttcgcagccaaagtggcatgtctggatccgatgttcgtgggcagcccaaattcc
gcagcggctacatcggggcccacgctgacttcagtcacctccctgggccaagcttccagg
ttgaagtacttgaactga
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