Silurus meridionalis (southern catfish): 124386231
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Entry
124386231 CDS
T08004
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386231 (ppfibp2b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124386231 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
CENP-F_leu_zip
LRRFIP
WHEP-TRS
FxsA
ADIP
Troponin
AAA_13
Motif
Other DBs
NCBI-GeneID:
124386231
NCBI-ProteinID:
XP_046705895
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All DBs
Position
5:25139648..25225560
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AA seq
1025 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKVMAEFTNGLPDLGSPVSVDSLPVLQLAEELRLALEI
YGGEGRDTLRSQLPTSTAQTLFQWLETGLVNRQPCSNNETYQERLERLEGDKESLVLQVS
VLTEQVEAQGEKIRDLEASLEEHHHKLVSTEEMLQQELLNRTSLETQKLDLIDEVSYLKL
KLVSMEEDHNHTDRDDKQHKAECVVNVISELQAQMRKFQQEITTRIREQRALEGHPENPD
RDVHNRSSDSDACPSDAEDPKHHCSSGGDNQALVHELRALKAKVDDLENEKSQYERKLKA
TKTEISELQQILASKDAEIESLRIQLLSRGNVNSDGVDREEVYRRKLKGKHLEMQKLKIG
MESLLAANDEKDRHIEELTVLLGQYRKCKDMMVLSQVCGDRLLCGSSEEDLSGSLRRRAL
PHKAHSDIVMSDLQMSSSRGTPQLLLPTMCLQNELDSSCRSLQSPMDCHSLHSRQWTTLR
MLSSSLEELQSGSKQRHAMGQTVEPVLESRLISESSKYQTLPGKFSRPALNGERERRSSP
FQLSPDESEESEINLNRCRSASAPALAKLEKTDESTLSDVSPMSSGMDSGQQSPVSPENK
KNQKGIRKLWGKIRRTQSGGMPADGVDSNDFKRGGVRSTAGPRLAGMGNRDSGRDLNNTP
FSKWSCDQVCMWLEEYGLGHYVPMASQWVSSGQTLLSASLHDFEKELGIKHPLHRKKLQL
ALHSFTTRQSEKSAELDHIWVTRWLDDIGLPQYKDQFHEGRVDGRMLQYLTVNDLLILKV
SSQLHHLSIKSAIHVLYVNKFNPFCLKRRPGDEMLTSPSEVIQWSNHRVMEWLRSVDLAE
YAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLNTNFNSLVGGQAQLEKQ
EYMESQNYTPLSTTAKIRPKKIGFSNFSQLRKKRPDDPSDYICPLECPKALTLLSDSQRP
VSSVQDTERREQMQITKGAAMQIEALSESINHLTDYREKKTELDRVAFSSNTKERLILCI
RETTL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgatgcgagtcacatgttggaggctgctttggagcaaatggatgacatcatc
gcaggctctaaggtgatggcggagttcactaacgggctgccggatctgggttctccggtt
agcgtggactcactgccggtgctacagttagcagaggagctgcgtttagctctggagatt
tatggtggagaaggtcgagatactctgcgctcacagctgcccacctccaccgctcagacc
ctcttccagtggctggaaactggcctggttaaccgccagccctgttcgaacaatgagacg
tatcaagaacgcctggagagattagagggggacaaagaatctctggttcttcaggtgagc
gttctgacggagcaggtggaggctcagggggagaagatcagagatctggaagcctctctg
gaggaacatcaccacaagcttgtctccaccgaggaaatgctccagcaggagcttctgaac
cgcacctcgttggagacccagaagctggatttgatagatgaagtttcgtatctgaagctg
aagctggtcagtatggaggaggatcacaaccacacggaccgagacgacaagcagcacaaa
gccgagtgtgtggttaatgtgatcagcgagctccaggcgcagatgcgcaaatttcagcag
gagatcactacacgcatccgggagcagcgggctctcgagggccacccggagaacccagat
cgtgacgtccacaatcgcagctccgattcggatgcgtgcccttctgacgccgaagacccc
aaacaccactgtagttctggaggagataaccaggctctggtgcatgagctgagagctctg
aaggccaaagtggacgatttggagaacgagaaatcgcagtacgagaggaagctgaaagcc
acaaagacggagatcagcgagcttcagcagattttggcctccaaagatgcagagattgag
agtttacgaattcaactgttgtccagagggaacgtgaacagtgacggtgtggacagagag
gaggtgtacaggaggaaattaaaaggcaaacatctagaaatgcagaagctgaaaatcggg
atggagtcacttttagctgcgaacgatgaaaaggatcgtcatattgaggagctcacagtg
ctgctcggccagtacaggaaatgcaaggacatgatggtgctttctcaagtgtgtggtgat
cgtttgctgtgtggcagcagtgaggaggatctgagtgggtcactgaggaggcgagctctg
ccccataaagctcactcagacattgtcatgtctgacctgcagatgtcgtcatcacgaggg
acgccacaactcctactgcccacgatgtgcctacaaaatgagcttgattctagctgtcgc
agcctgcagtcccccatggactgccacagcttgcacagcagacaatggacgacactgagg
atgctgtcttccagtctggaggagttacagagtggatccaaacaaaggcatgcaatggga
cagactgtagagccagttctagagagtcggctcatatcggagagcagtaagtaccaaact
cttcctgggaagttttccagacccgcactaaacggagagagggaacgacgttcatctcca
ttccagctgtcgcctgatgagagcgaggagagcgagatcaacctgaatcgctgcaggagt
gccagcgccccggcgttagcaaagttggagaagacggacgagtccacattgtcagatgtg
tcgcccatgtcatccggcatggactcggggcagcagtcacctgtttctcctgagaataag
aagaatcagaaaggcatcaggaagctgtggggaaagataagaaggacccagtcaggtgga
atgcctgcagacggtgtggacagcaacgatttcaagaggggaggagtccgttccacagca
ggccctcggctggctggcatgggcaacagagattcgggaagagacttgaacaacactccc
ttttcaaagtggtcatgtgaccaggtgtgtatgtggctggaggaatatgggctgggacac
tatgtccccatggccagccagtgggttagcagtggacagactctcctctcggcctccttg
catgacttcgaaaaggagctggggataaaacacccgctgcacagaaagaagcttcagctc
gccctgcactcgtttaccacacggcagagcgagaaatcagcagagctcgaccacatctgg
gttacacgatggctggatgatatcggtttaccgcagtataaagaccagttccatgaaggt
cgtgtggacgggagaatgctgcagtacctcactgtgaacgacctactgatccttaaagtg
agcagccagttgcatcacctgagcattaaaagtgccatccatgtgctgtatgtgaacaag
ttcaaccctttctgcttaaagaggaggccgggggatgagatgctgacgtcaccctccgag
gtgattcagtggtccaatcaccgtgtgatggagtggcttcgctcagtagatcttgctgaa
tacgctcccaacctgaggggcagcggtgtacacgggggtctcattatcctggagccacgc
tttaactcggacacattggcgatgctgctgaacatcccaccgcagaagaccctgctgagg
agacacctcaacaccaacttcaactctctagtgggaggtcaggctcagctggagaaacag
gaatacatggagtctcagaactacacaccgctctccactacagctaaaatccggcccaag
aaaatcggtttctccaacttcagccagctccgaaagaagcgccctgatgaccccagtgat
tacatctgccctctggagtgcccgaaggctctgacgctgctcagcgattcccagcgaccc
gtctccagtgtacaggacactgagaggagggaacagatgcagataacgaaaggagcagcg
atgcagattgaagcgttatcggaaagcattaaccacctcacagactacagagaaaagaag
acagaattggacagagttgctttttcctcaaacactaaagaaagactaatactgtgcatt
agagaaacaacgctctga
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