KEGG   Silurus meridionalis (southern catfish): 124387554
Entry
124387554         CDS       T08004                                 
Symbol
her6
Name
(RefSeq) hairy-related 6
  KO
K06054  hairy and enhancer of split 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03460  Fanconi anemia pathway
smeo04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    124387554 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124387554 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smeo03000]
    124387554 (her6)
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124387554 (her6)
Transcription factors [BR:smeo03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    124387554 (her6)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     124387554 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH
Other DBs
NCBI-GeneID: 124387554
NCBI-ProteinID: XP_046708305
LinkDB
Position
1:complement(32372581..32374635)
AA seq 274 aa
MPADPMEKNSSSPVAATPASLNSVPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNADPTVLGKYRAGFSECMNE
VTRFLSTCEGVNAEVRTRLLGHLASCMSQLNAMNYSAQAHAGAAPPPPPPSATFGQPVVQ
IPGATHVPVPVSVPACKSAPPPGASPSDAAKVYGGFQLVPATDGQFAFLIPSGAFNPGGP
VIPVYASGAGTGLPSAAASPREASLTPDSVWRPW
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccagctgacccgatggagaagaactcatcgtccccggtggctgcgacccccgcaagc
ctgaacagcgtcccggacaaacccaagaccgcctccgagcacagaaagtcatccaaaccc
atcatggagaaaaggagacgcgcgaggatcaacgaaagtttgggtcagctcaagactctc
atcctggacgctcttaaaaaagacagctccagacactccaaactggagaaagcggacatc
ctggagatgaccgtcaagcacctgaggaacatgcagcgcgcgcagatgaccgccgctctg
aacgcggaccccaccgtgctcgggaaataccgcgcaggcttcagcgagtgcatgaacgag
gtgacccgtttcttgtccacgtgcgagggcgtgaacgccgaggtgcgcacgcggctcctg
ggacacctggccagctgcatgagccagctgaacgcgatgaattactcggcgcaggcgcac
gcgggagccgcgccgccgccgccgcctccttccgcgaccttcggtcagcccgtggtgcag
atccccggcgccacgcacgtgcctgtgccagtgtcggtgccggcgtgcaagagcgcgcct
ccccctggcgcgtcgccttcggacgcggccaaggtgtacggaggcttccagctcgtccca
gccacggatggacaattcgccttcttgatccccagcggcgcgtttaaccccggcggcccc
gtgatcccggtgtacgcgagcggcgcgggcacgggcctcccttcagccgccgcgtctccg
cgcgaagcgtcgctcactccagactctgtttggagaccttggtag

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