Silurus meridionalis (southern catfish): 124387742 Help Entry 124387742         CDS       T08004                                  Symbol cop1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04115   p53 signaling pathway smeo04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     124387742 (cop1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     124387742 (cop1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:smeo04121]     124387742 (cop1) Enzymes [BR:smeo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      124387742 (cop1) Ubiquitin system [BR:smeo04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     124387742 (cop1)   Multi subunit Ring-finger type E3    Cul4 complex     Target recognizing subunit (DCAF)      124387742 (cop1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 WD40_like UvrD-helicase zf-RING_10 zf-rbx1 CREPT Sina_RING zf_C2H2_10 Tma16 TRAF3_RING Motif Other DBs NCBI-GeneID:  124387742 NCBI-ProteinID:  XP_046708224 LinkDB All DBs Position 6:complement(6810707..6827354) Genome browser AA seq 696 aa AA seqDB search MSGCRQQQQPVPASGTPPGTAPGTSSGSTATAAVANSGGSSANANGNGISSRSVGSGSEV QLLGTQRPSLSGSNYSKKRPLHNGLINPYEDKSNDFVCPICFDMIEEAHMTKCGHSFCYK CIRRSLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQFF QDVLGTDQEHLDLANVNYMLELLVQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQL QKELNFLEEDIKSVQDMSGLYPPVIDMDPNLDSTVPQFGETHSPAPSCSIIEPSEYIQPP QFGGSSQGKRQTSYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMEC LSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQ DAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKR CWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGC ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRS FKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDD TNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELI NT seq 2091 nt NT seq  +upstreamnt  +downstreamnt atgtcaggctgccggcagcaacagcaacccgttcctgcgtcgggaactccaccgggaact gcaccaggaacgagctcaggcagcaccgccaccgctgccgttgctaatagcggagggagc agcgctaatgctaatggcaatggcatttcttcgcgaagtgtcggctcagggagcgaggtg cagctcctgggtacacagagacccagtttatccggtagcaactacagcaagaaaagacct ctccataacggccttattaacccttatgaggataagagtaatgattttgtatgtcccata tgtttcgacatgatagaggaagcacatatgactaaatgcggtcacagtttctgttacaaa tgtatacgaaggagtttagaggacagcaacaggtgccccaaatgtaattacattattgat aatgtggatcagttgtaccccaacttcttagttaatgagctgatcctcaagcagaaacag agatctgaagagaagcgactaaaacgggaccaccctaatggaaccaaatggcagtttttc caagatgttcttggcacagatcaggagcatctggatctagcaaacgtcaactacatgtta gaactgctggtgcagaaaaagaagcagcttgaagcggaatcgcaagcagctcagcgtcaa attctaatggagttcttaaaagaagccagaaggaataagcgagagcaactggagcaatta cagaaagaactaaactttctggaagaggacataaagagtgttcaggatatgagtgggctg tacccaccagttattgatatggaccccaacttggacagcactgttccccagtttggagag acgcactctcctgcccccagctgtagcatcattgagccatcagagtatattcagcctccc cagtttggaggaagctcacagggtaaaagacagacatcatacaacagcactctggcctct cggagaaagaggttaacagcacactttgaagacctggagcagtgctacttttccaacagg atgtcacgaatcacagatgacagcagaactgttaatcagctagacgacttcatggagtgt ctctccaaattcacacgctacaactctgtacgccctctggccactctgtcttatgcgagt gacctctataatggttctagtattgtttctagcattgagtttgaccgtgactgtgattat ttcgccattgctggtgtcaccaagaaaattaaagtttttgagtatgggacagtcatccag gatgctgtggacattcattatcctgtcaatgaaatgacctgcaactccaaaataagctgt atcagctggagtagctaccacaagaaccttctggccagcagtgactatgaaggaacagtg attctttgggatgggtttacagggcagaggtcaaaggtttatcaggagcacgagaagaga tgttggagtgtcgattttaaccttatggatcccaaacttttagcttcaggctcagatgat gcaaaagtcaagttgtggtcaactaacctggataattcagttgccagcattgaagccaag gccaatgtgtgctgtgtcaaatttagcccaacgtctaggtatcaccttgcatttggctgt gcagaccactgtgtccactactatgatttgcggaacactaagcaacccatcatggtcttc aaaggacatcggaaggctgtgtcctatgcaaagtttgtcaacggagaagaaatcgtgtct gcctccacggacagccagctaaagctgtggaatgtgaacaagcctcactgcctgcgttct ttcaaaggccacattaatgagaaaaactttgtaggtctggcctccaatggagactacgta gcatgtggaagcgagaacaactccctatacctgtactacaaggggctctccaaaacattg ctgaccttcaagtttgacactgtgaagagtgttctggacaaggacaagaaggaagacgac actaacgagtttgtcagtgccgtttgctggcgggctttaccagacggggagtctaatgtg ctgattgcagccaatagtcaaggaacaatcaaggtactcgagctcatttga

DBGET integrated database retrieval system