Silurus meridionalis (southern catfish): 124388045
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Entry
124388045 CDS
T08004
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smeo01100
Metabolic pathways
Module
smeo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124388045 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124388045 (chpf2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
124388045 (chpf2)
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
O-Glycan
124388045 (chpf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
124388045
NCBI-ProteinID:
XP_046708627
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Position
6:10443359..10453059
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AA seq
763 aa
AA seq
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MRLSPFLTIFRPALPLILGLSLGCSLSLLMVSWTQGDTDEVCSDPLRLGLLQGTRVGEPQ
RADEGDRNEDFQPRIVPYHKDPSKPHKKVLRTRYIHTELGIRERLLVGILTSRATLNTLA
VAVNRTVAHRFHRTFFFTGLRSAKLPHGMTVVAHGDDRPVWLMYETIRHLHQHHGNEYEW
FYLAQDDTYTQAERIMNLVGHLSSGQDLYMGRAEEFIGGEERARYCHGGYGYLLSRSLLA
RLQPHLDSCRNDILSVRPDEWLGRCIIDFLGLSCMEKHQEMTYYYFELQKNADPEREDSI
QFKNAFSVHPVSEPALMYRLHKRYSQIELEWTYAQIQQLQVQISNLSELTPDGKAGATWP
IGVNPPFHPKTRFEVINWEYFTEEHIFSCADSSPKCELRGVDRADVNSILETAVERLNER
YQPQLRFRKQRLLNGYRRFDPTRGMEYILDLALQAFTQKGHSQVIAKRVGLLRPLSAIEI
IPMPYVTEATRVQVILPVTARDQDFVGNFLDTYVMNTLDTRDNALLTFLFVYDPFDAQRV
SQTDVFASVKSMISEVEKRYSDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLASVW
TEVTGDFLNRCRMNAISNWQVFFPVHFQEYSPALVYRDQQPSAASSFSSEALRDGRFDRH
AFEEACFYNADYMATRTKMATDIMDNEELLESMDVYEIFVRYSSLHVFRAVEPALIQKYV
RRACNPRFSEDIYHRCVLSNLEGLASRSHLAMALFEQEQANST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtctccgttcctcaccatcttccggcctgccctgcctctcatcctgggtctt
tctctgggctgcagtctcagcctgcttatggtgtcctggacgcagggggacacggatgaa
gtgtgcagtgatcctctgcgtctcggacttcttcagggcacccgtgtcggagaaccccag
agggcggacgaaggggacaggaacgaggatttccaacctcgcattgttccctaccataaa
gatcccagcaagcctcataagaaagtactcaggacccgttatatccacactgaacttggc
atccgtgagcgcctcctggtgggcatcctgacctcgcgtgccaccctgaacacgctggcc
gtggcggtgaaccgtacagtagcccatcgcttccaccgcaccttttttttcaccggcctt
cgcagtgcaaagctgcctcacggcatgaccgtggtggctcacggagacgaccgacccgtc
tggctcatgtacgaaaccatccgtcacctgcatcagcaccatggcaacgaatatgagtgg
ttctatctggcccaggacgacacgtacacacaggcggagcgcatcatgaacctagtgggg
catttgagttcggggcaggatctctatatgggccgggctgaagagtttatcggcggggaa
gagcgagctcgttattgccacggcggctatggatacctgttgtcacggagcctcctggcc
cggctacagccacacctcgactcttgccgcaacgatattctgagcgtcaggcctgatgag
tggctgggtcgctgcattatcgacttcctgggactgagctgcatggaaaagcaccaggag
atgacctactattactttgagctgcagaaaaacgcagaccccgagcgagaggacagcatc
cagttcaagaacgccttcagtgtgcacccagtctcagagccggctctcatgtatcgctta
cacaaacgctacagtcagattgagctggaatggacctacgcccaaatacagcagctacag
gttcaaatcagcaatctgagcgagcttactccggacggcaaagcaggagccacttggcct
attggcgtcaacccgcctttccatcccaagactcgattcgaagtaatcaattgggagtat
tttacagaagagcacatcttctcctgcgccgacagctccccaaagtgtgagctccgtgga
gttgatcgtgcagatgtcaactccatcttggagactgctgtggaacgtttaaacgagcgc
taccaaccacagctgcgtttccgaaagcagcgtttgttgaacggctaccgccgctttgac
cccacacgtggcatggagtatattttggacctggcccttcaggccttcacacaaaaaggc
cacagtcaggtgatcgccaagcgtgtgggcttgctaaggccactcagtgccatagagatc
attccaatgccttatgtaaccgaagcaacgagagtacaggtcatccttccggtgacagcg
cgggatcaggactttgtaggcaactttttggacacgtatgtaatgaacactttggacaca
cgggacaatgctttgttgacctttctttttgtgtatgaccccttcgatgcacagagggtc
agccagactgatgtcttcgctagcgtgaaatctatgattagcgaggtggagaaacgctac
agcgacgtgaagatcccatggatcagtgtcaaaacagaggttccctcacaggtcaaactg
atggacatcatctccaagaagcatccagtggacacgcttttcttcctagccagcgtctgg
accgaggtcaccggtgacttcctaaaccgctgccgcatgaacgccatcagtaactggcag
gtcttcttccctgttcatttccaggaatacagcccagctctagtgtatcgtgaccagcaa
ccttctgcagcatcgtcgttttcctcagaggcgctcagagacggccgctttgaccggcac
gcttttgaggaggcctgtttttacaatgcagattacatggccacccgtaccaaaatggcc
actgacatcatggacaatgaagagttgctggagagcatggatgtttatgagatttttgtg
cgctactcaagcctacacgtcttccgggcagtagaaccagctctgatccagaaatatgtg
cggcgagcctgcaacccccgtttcagtgaagacatctaccatcgttgtgtgctgagcaat
ttagaggggctggcttcacgatcacacttagctatggctttgtttgaacaagagcaggca
aacagcacctag
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