Silurus meridionalis (southern catfish): 124389061
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Entry
124389061 CDS
T08004
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124389061 (med1)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
124389061 (med1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
DUF3915
Motif
Other DBs
NCBI-GeneID:
124389061
NCBI-ProteinID:
XP_046710231
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Position
7:complement(2929118..2939358)
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AA seq
1767 aa
AA seq
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MAVASAAVAATLRGVSPAREPALDRVKVEEGTETEKQSRVSALLERLHAKHNASRPWPET
SKVVRTAMEKRGVMNSAGHQLLLNCLETLQRALKVSSLASMTDRLESIARQNMLGSHLSP
SETECYITSDMFYVEVQLDTMGQLIDVKVAHHGENPASCPELIQHLREKNFEEFSKHLKG
LVNLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRIATKANTVETILHGGVGLLTQRSG
GQLLSLQCYVSPYDIFEEGTGAQLNFTDATFPRSFGVSVSVTVEGTSSVYKLPIAPLITG
SHPVDNKGTPTFSPASNSNCVDLPACFYLKMKQPMPFSLSFIHKLGNVTGIPVFESVPAL
SPLYDLIIKSQFSEEGGSGAPASARSKRFYASLPGQQHCYFLNGDAPVQDGKSLQGALVT
KIPFRHPAHVPTLLDIIRHQAAYNTLIGSCVKKTYIKEDAPGLLQFEVCPLTDSSFSVSF
QHPVNESLVCVVMEVIDSRQVACKLYKGLSDALICTDEFITKVVQRCMSIPVTMRAIRRK
AETIQADTPALSLIAETVEIMVKKNLPPTGSPGYMGMGTGPDGSNSVGLPGVGGGTTPTG
GSSAGNMGAGGQFPGAMSSFFNMSHQGGSVGDTMGQQQQQLPPQHGHGSDDFSKVTQNPI
LTSLLKITGSVGSSPTTQSSAGSQPHQTPPPTTSPASNTKNHPMLMNLLKDNPSQDFAAL
YGSSPLERQNSSGSPRTDSQGQPCPGGGTKGKKKRPRGTDKGVMGPGGGMGMKPQSQQQQ
MGSLIQQHHHTHPPTEDDFHRELFSMDVDTSQNPIFDVNLPGDGLDTPHSITPAPSQCGT
PPSGPGMSYHPQSHVQSQSQAQSQPSGSLPRMVRLSSSESIGPDINDILSDIPDPATKGC
GQHHMGGEEGGSLDTPLRDSSSSGQGSAVFEADLFNANSNENTYTDPADLLAEATTAATP
NSDASSSNFFPDTDFNPELLPGQGTFSHTSYFDSSPSPEQDLDLVKSFSGGSQQNTPSGT
PQNPTSHGRNTPDASLKDPFDVSMVFSGGGKPLLGPGPDLSDSHGGGGQSPLTMGIAGLG
SDFKSSEVKVKQQQMRPKEDNSGGNSGMGIGGSGSSEGKQMKRSRTPSSEGKSKEKPPKR
KKLDPEGKSPSHSSGGRPYTPPSGSVSSGGSMSGGGSKSPGSSGRSQTPPGGATPPIPKI
TIQIPKTLTGGKTSSHGGYTSSSSAAGSTGGTGGSSSSKSHHSHSSSSSGKIKTSKMEGS
MGQGNSSKPPGAGGSGSGMNPQSKSSSLGMGSGKPGSSPITKHGMSGSGSSGSSGAVSGN
KMRPQGGKPPGSLINPSIKPNISPSHSRAGSSDKLSSPMKHQQGTVPGTPPSSKAKSPIG
SGSGSSGGSKSSGGGMSSQKQLGSGSSSGSSSSSTSSASSASSGSMSFSSGGQSQYGGSG
GGGGGGGGGGGNNPNAKGKSPSRNKKPSLTAVIDKLKSVGSGGVGGEECEGGGGGGGPGS
NTASGGGGVPPNVGPPKRDKVEKEGKSKGTLSSGNSGDKKMMDPKSSGVSSTGVAKIIIS
KPDGGSPSIKSKVTLQKPGDGSAEASMRPQLSGLKASPLFSGSTPKHDRSSPSHSRSPGY
TPLFQDSESESGSSSVAEKSHQNSTSSDDDQSMRPIQPPQDYMSVSLGEKHKKHKKEKKK
QKERERERERERDRDREKEKKKSTMSCGPSSHPIKADSWSRSPLSSEPSMSLLSSERVSR
PSPVYMHTEDDDLMDSALTGSNLEPFK
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgtctgcagcggttgcggctacgctccgaggcgttagtcccgccagagaa
ccagctttggaccgcgttaaagtggaggaaggcaccgaaacggagaagcagagtcgtgtg
tccgctctgctggagaggctgcacgccaaacacaacgcctcaaggccatggccggaaacc
agcaaagtcgtccgcacagccatggaaaagcgtggtgtaatgaactcagccggtcatcag
ctcctgctcaattgtttagagacgcttcagagggcacttaaagtgtcctccctggcatcc
atgaccgatcgtctggaatccatcgcccgtcagaacatgttggggtcgcacctgagtccc
tcggagacagagtgctacatcacctcggacatgttctatgttgaagtgcagctcgacacc
atgggccaactgatcgacgtcaaagtggctcaccacggagagaaccctgcgagctgtccc
gagctcatccagcatctgagagagaaaaactttgaggagttctccaaacacctgaagggt
ctcgtgaacctgtacaaacttcctggggacaacaaactgaagactaaaatgtacctggcc
ctgcagtctttggaactggaccttactaagatgatgcacatgttcaggatagccacaaag
gccaacacggtggagactatcctgcacggcggcgtgggcctgctcacccagaggagcggc
ggccaactcctgtccctgcagtgctacgtctcgccttacgacatttttgaggagggaacc
ggcgctcagctcaacttcaccgacgcaaccttccctcgttctttcggagtgtccgtgtct
gtgactgtggagggaacgtcgtctgtctacaaacttcccatcgcgcctctcatcaccggc
tctcacccagtggataacaaaggtacaccgacattttctccagcgtcaaactcaaactgt
gtcgaccttccagcgtgtttctacctgaagatgaagcagcccatgcccttctcactatcc
tttattcacaaattgggcaacgttacgggtatcccagtgtttgagtcagtccctgccttg
tctcctctctatgatctcatcattaaaagtcagttcagtgaagaaggtggcagcggcgct
ccagcgtcggcccgatccaagagattttacgcatctctgccaggacagcaacactgttac
tttctgaatggagatgccccagtgcaggatgggaaatctctgcagggagctctggttacc
aaaatccctttccgacaccctgctcacgtacccacgctgctggatatcatacgacaccaa
gcagcatacaacacgctgatcggtagctgtgtcaaaaagacctacataaaggaagatgcc
ccagggctgctgcagtttgaggtttgtccactgacagactccagctttagcgtatccttt
cagcaccctgtcaacgagtctcttgtctgtgtcgtaatggaggtgatcgactcacggcag
gtagcgtgtaagctgtacaagggcttgtctgatgctttgatctgcacagatgagttcatt
accaaggtggttcagcgatgcatgtccatccctgtgaccatgcgtgcgattcgtcgcaag
gcggagacgattcaggcagacaccccagccttatccctaatagctgaaactgtggagata
atggtgaaaaaaaaccttcctcccacaggaagccctggatacatggggatgggcacagga
cctgatgggagcaacagtgtgggcctacctggtgtagggggtggtactacacctacagga
ggcagtagtgctgggaatatgggtgcaggtggtcagttcccaggtgcaatgagttcgttt
ttcaacatgagccaccaaggaggttcagttggggacactatgggacagcaacagcagcag
ctcccaccacagcacggccacggttcagatgactttagcaaagtgactcagaacccaata
ctcaccagccttcttaaaataacaggtagtgtaggttctagccccactactcagagctct
gctggctcacagccacaccagacccctccaccgaccacctcgcctgccagcaataccaaa
aaccatcccatgctaatgaacttgttgaaggacaacccctcgcaggactttgctgcttta
tatgggagcagccctctggagagacaaaactcttctggttctcctcgcacagacagccaa
ggtcagccgtgtcccggaggaggcaccaaaggcaagaagaagcgaccaaggggcaccgat
aagggtgttatgggacccgggggaggtatgggaatgaaaccgcaatcccagcaacagcaa
atggggagcctaatccagcagcaccatcacacacaccctcccactgaagacgactttcat
cgtgagctcttttctatggatgttgacacgtctcaaaatcctatatttgatgtcaatctt
ccaggtgatgggttggacactcctcacagtatcaccccagctccaagccaatgtggaacc
ccaccatcaggccccggaatgtcgtaccacccccaatcacacgtccagtctcagagtcaa
gctcagtcacagccatcaggctctttacctcggatggtgcgcctctcgagctctgaaagt
attggtcctgacattaatgacattctgtctgatattcctgatccagccaccaaagggtgt
gggcagcatcacatgggtggggaagaaggaggttctctagacactccattaagggattcc
tctagctcaggccagggtagtgccgtattcgaagctgatctgtttaatgccaacagcaat
gaaaacacctacactgatccagcagatctgttagcagaggccactactgcagctacacca
aatagtgatgcctcctcaagtaatttctttccagacacagacttcaatcctgagttactg
cctggtcagggcaccttctcacatacgagctattttgacagttcacccagtccagagcag
gatcttgacctggtgaagagtttcagtgggggaagtcagcagaatacaccgtcgggaacg
cctcagaatccaacttcgcacggcaggaacacacccgatgcctccctaaaggaccctttt
gatgttagcatggtttttagtggaggagggaaacctttgctgggcccagggccagatttg
agtgattcacatggaggtggtggacagagtccactgacgatgggtatcgcaggacttggc
agtgactttaaaagtagtgaagtaaaggtcaaacagcagcagatgagaccgaaggaagat
aacagtggaggtaactctggaatggggataggaggatcaggctcttccgaaggaaagcag
atgaagcgtagtcgtacaccttctagtgagggaaaatcaaaagaaaaaccacctaagcgt
aaaaagctcgatccagaaggcaagtctccttcacacagctctgggggtcggccctatacc
cctccaagtgggagtgtcagttctggtggttcaatgagcggaggtggatccaaatctccg
ggtagctcaggtcgttctcagactccaccaggaggtgctaccccacctatacctaaaatc
acaatacaaataccaaaaaccttaactggtggcaaaacgtcttctcatggtggttatact
tcaagcagttcagcagctggaagtactggtggtaccggtggctcgagcagcagtaaaagc
caccattcccactcctcttcatcttcaggaaaaataaagactagcaagatggaaggctcc
atgggtcaaggtaacagttctaagccaccaggtgcaggaggaagtgggagtggcatgaac
ccacagtccaagagctcttctctcggcatgggttcaggcaaaccaggctcttctccaatc
actaaacatggtatgtcaggttcaggtagcagtggcagcagtggagcagtcagtgggaat
aaaatgaggccccaaggaggtaagcctcctggatcactgataaatcctagcattaagcca
aacatttctccttcacactctcgggctgggagttctgacaaactttcctctccgatgaaa
catcagcaaggaacggttccaggaacgccaccatcctcaaaagctaagtcaccaattggt
tctggaagtgggagttcaggggggtcaaaatcttctggtggtgggatgagttcccagaaa
cagttaggaagtggttcttcttctggttcttcctcttcttccacttcatctgccagctcc
gcttcatcaggctctatgtcattttcttctggtggtcaatcacaatatgggggtagtggg
ggtggtggaggaggaggtggagggggtggagggaacaaccctaatgccaaaggaaagtct
cctagccgaaacaaaaaaccttccctgacagcagtcatagacaagcttaagagtgtggga
agcggtggcgtcggtggagaggagtgtgaaggcggaggaggtggtggtggtcctggtagc
aatacagcgagtggaggtgggggggtacctccaaatgttggtcctccaaaacgagacaag
gttgaaaaagaaggaaaatccaagggaactctttcatctggaaattcgggcgataaaaag
atgatggatcctaaaagtagtggagtgagcagcactggtgtggctaagattatcataagc
aaacctgatggtggttctccaagcatcaagtccaaagtaactcttcagaagcctggtgac
ggatcagcagaagcttcaatgcgcccccagctttcaggcttgaaagcgtcacctcttttc
agtggctcaacaccaaagcatgaccgcagttcccccagccacagccgctcgcccggatac
acccctctctttcaggacagtgagagcgagtcgggtagcagttcagtggcagagaaatcg
catcagaacagcaccagctccgacgacgatcagagcatgaggccaatccagccaccacag
gactacatgtcggtcagcctgggtgagaaacacaagaagcacaaaaaagaaaagaaaaag
cagaaagaacgggagagggagcgggagcgggaaagggaccgggatcgagagaaggagaag
aagaaatcaacaatgtcctgtggtccctcttcacatccaataaaggcagacagctggtcc
aggtctcctctgtcttcagaaccctccatgtctttgctcagctctgaacgtgtctctcga
ccgagtcctgtgtacatgcacactgaggatgacgacctcatggactctgctctgacaggc
tccaacttagaaccgttcaaatag
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integrated database retrieval system
