Silurus meridionalis (southern catfish): 124389439
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Entry
124389439 CDS
T08004
Symbol
josd1
Name
(RefSeq) josephin-1
KO
K15235
josephin [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124389439 (josd1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124389439 (josd1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124389439 (josd1)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C86
124389439 (josd1)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
124389439 (josd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
Motif
Other DBs
NCBI-GeneID:
124389439
NCBI-ProteinID:
XP_046710852
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All DBs
Position
7:complement(11642980..11646751)
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AA seq
237 aa
AA seq
DB search
MGSTPCSGKGRGVGSFQELGCMPWKVSKQKGEAAGDGCTTESYEALNARVVSPPQQPPAI
YHEKQHRELCALHALNNVFQDGAAFSREALQEIYQRLSPSTLVTPHKKSMLGNGNYDVNV
IMAALQTHGYEAVWWDKRRDVSSIALPNVTGFILNVPSNLRWGPLRLPLKRQHWIGVREV
GGVYYNLDSKLRNPHPIGTADELRKFLRHQLRGKNCELLLVVLEEVEVHQTWRTDNF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacaccgtgttctggtaaggggaggggggtaggtagttttcaggagttaggc
tgtatgccatggaaggtgagcaagcagaaaggtgaagctgctggagatggatgtaccact
gaatcgtatgaagctttaaatgccagagttgtctctcctcctcaacaacctcctgccatc
taccatgagaagcaacacagagagttatgtgctctgcatgcactaaataatgtcttccag
gatggtgctgcctttagtcgagaggcacttcaagaaatctaccagaggctgtccccgagc
acattggtaacccctcacaagaaaagcatgctaggtaacggcaactatgatgtaaatgtc
atcatggctgctttacagactcatgggtatgaagctgtttggtgggacaaaagaagagat
gtaagcagtattgcactgccaaacgtgacgggcttcattttaaatgtgccgtccaacctt
cgttggggtcctctgcgtctgccactaaaacgtcagcattggattggagtgagggaggtg
ggcggagtctactataacttggactcaaaactacgcaatccccatcccattggaacagct
gatgagctcaggaagttcttgcgtcaccagcttcgaggaaagaactgtgaactgctgttg
gttgtgctggaggaggtggaggtccatcagacctggaggactgataacttctga
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