Silurus meridionalis (southern catfish): 124393230
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Entry
124393230 CDS
T08004
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124393230 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124393230 (pom121)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124393230 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
124393230
NCBI-ProteinID:
XP_046716788
LinkDB
All DBs
Position
11:13202298..13215055
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AA seq
1235 aa
AA seq
DB search
MFPADKRRLAFISVLAIVLFFLVLTCIPTYLYVLFFFAVTCAVCYYRAEGSQLFERLGLN
PRRGLTDPTALHRWLPATIFTGSPATGRDKRNKNKSDARNSLASPSDRSFTSGSVYRRDA
TFSDSLFSPRNILMGSYLGKAESSPSTGQPAGSAGSGVNPREHLRERLVRPNYGVPTPNR
RLSFGDPIGGAGRFTITPQRHYPLQQLGTSPVGVLPPAQWDGFRKKNILTQRNTSVHSPV
TVKIARPDNTTRTSFFDQLNSPGAVTSPGFEVQADPCSRETVLNVLRANRKRDVCDEEER
THEAGQKSKRRRNDSSESSQSVFEKLLANGAPSQLVPKPGSLKRGMNVSVLEESVVKRSR
TSSLNSVSGCPISHGVPGSARNPIRSSYSSSQGYPQRGLASNLNSSPIVSPGSSQSQTPE
RVSKKPREDDSFSPNSDSAVNSDRTSTEAAPGSGKCSPRPDPPVTSQAASGGSISKRKRK
IQLVSTYRGDHISLPPPPELGYTITVKDLDMEKKATLTQIQKVLQEPESEKPSSIPISSA
PAAPSVGMLSQVVSFSSASAAPVGSATSLASLFTPAAGLPPASHAVSIPGPTPTIDLTVP
PISTVSAVPIQAAVLPIPAISTTSATPVSNPLLESLKSMKNNSLLSVPSPVAATSAAPAT
SVAAQASSSITSTTLSFGAVKSEPSIVTPQSTVSTAPSSVASAFAQILAQPLPSSSVTLN
LGGGPFVFTSSAPTACATIAPTVSVPPASSRSNPTPSEFKPIFGPAMMTPASTAADKPSQ
NTFKPIFGSAFNQPASSTVPAAQINTSLFGGVTSTQPVSCSVPLPVPNTQNSSQSLFGSQ
SNSHSVALSVSMSSTQNPSPALFGGLTNSQTMAVSVSSSSKNTQNSTPSLFGGLPNSQPM
AASVLTSSSNAQNPAASLFQGLNSSSMTASTSSSTQNSSTPLFAGWNAAKSTFQFGGSLS
TAASSGISTSTTTNSTNTTLQFGALKPAPTAPQNTFTFGQSPATTSFTGFGMPNNANPMT
NTPSTQATFGSSAFSPSTCFANPQSQAPTPVKPFTFGASAGGGTAATPLAFGTPASTAAP
TFGNSTQSAFGGTSTAFAFGNTSTVPVSAASMPAPAFKFGAAQAAQQNSTATSGGFNFTT
PLSGAQFGTPTQTGQNQGFSFGAGNTDNESAFGTSTSGYGAASGPSPFGSPGTPVGGFGA
SAFGTPSATFSIGACSKPSGSRQRLQARRQHTRKK
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgcagataaacggcggctagcttttatctctgtactcgctattgtcttgttt
tttctagtgttgacttgcataccaacatatctgtacgtgcttttcttttttgccgtaact
tgtgccgtttgttattacagagcagaggggtctcagctttttgagaggttgggcctaaat
ccccgccgtggactgacagatcctaccgcgcttcaccgctggttgccggccacgattttc
acgggctctccggcgacaggaagagacaagaggaataaaaataaaagtgatgctagaaat
tcgttagcgtctcccagcgataggagttttaccagcggttccgtttataggcgagacgcg
acgttcagtgactcgttattcagtcctcggaacatcctcatgggcagttacctcggtaaa
gcagaaagttcccccagcacggggcagcccgctgggagcgcgggttctggcgtcaacccc
agagaacatctccgggagagacttgtccgacctaattatggagtccccactccaaacaga
agattatcgttcggtgaccctataggtggtgcagggaggttcaccattacccctcagaga
cattacccgctgcagcagttaggaacctctccggttggtgtacttcccccagctcagtgg
gacggcttccgcaagaagaacatcctcacgcagcgcaatacatcagtacacagtcctgtg
acggtgaagattgcaagaccggacaacacaacacgcacatccttttttgatcagttgaat
tctcctggagcagtcacatccccagggtttgaagttcaagctgacccctgttctagagag
acagtactgaatgtgctcagagcgaaccgtaaacgagatgtttgtgatgaggaggaaaga
acccatgaagctggacagaaaagcaaaaggaggcggaatgacagcagtgaaagttctcag
tcagttttcgagaaactgctagctaatggtgctccatcccagcttgtaccaaaacctgga
agtttgaagagaggaatgaacgtctctgtgttggaggagtctgtggttaagagatctcgg
acttcttccctcaactccgttagtggatgtcccatttcccatggtgtgcctggatcagcc
cgcaaccctattcgtagctcttacagttcttcacaggggtaccctcagaggggattagca
tctaatctaaattcatcacctattgtgagccctggatcatcacaatctcagactcctgag
cgggtatccaaaaagcccagggaagatgactccttttcaccaaattctgattcagctgtt
aactctgataggacatccactgaggctgcgcccggctctggtaaatgctcccctaggcct
gatccacctgttacatcacaagcagcctctggaggaagcattagcaaacgtaaacgtaaa
atccagctggtgtccacctacagaggcgaccatatatctttgcccccacctcctgaattg
ggttacacaatcactgtgaaggacctggatatggagaaaaaagctactcttacccaaatc
cagaaagtccttcaggagccagagtcagagaagccaagcagtatccccatttcatctgct
cctgcagctccctctgtaggcatgttatcccaggtagtttcttttagctcggcttccgct
gcccctgtagggagtgctacttcactggcctctctgtttaccccagctgctggtcttcca
cctgcttcgcatgcagtttctatcccaggtccgacaccaactattgaccttacagttcct
ccaatcagcacagtcagtgctgtaccaatccaggctgcagtgttgcctatacctgccatc
agcaccacttcagctacaccagtgtctaatccacttttggagtctcttaaaagcatgaag
aacaactctcttctaagtgttccttctcctgtagctgctacctctgcagccccagcaaca
tctgtggcagcacaggcttcctcctccattacctccacaactttaagctttggggctgta
aaatctgagccgtctattgtcactccacaatccacagtgtcaactgcaccttcctcagta
gcctctgcttttgcccagattctggctcagcctttaccatcctcatctgtcacactcaac
cttggaggaggcccctttgtattcacttcttctgcaccaacagcctgtgcaacaattgct
cctacagtttctgtgccacctgctagcagtagatcgaatccaacaccatctgagttcaag
cctatttttgggccagccatgatgacaccagcctccacagcagcagacaaaccatcacaa
aacacatttaaacccatttttggcagcgcatttaatcaaccggcttcttcgactgtacca
gcagctcagattaacacatctttatttggaggtgtcacaagcactcaaccagtgtcttgc
tctgttcccttaccagttcccaatacacagaattccagtcaatctctgtttggaagtcag
agcaacagccattcagtggctctttctgtctccatgtccagtacccagaatccttctcca
gcactgtttggaggattgactaacagccaaacaatggctgtttcagtttcatcctcctcc
aaaaatacccagaattctactccatctctgtttggtggactgcctaacagccagccaatg
gctgcatcagttttgacatcttcctccaatgcccagaatcctgctgcttccctctttcaa
ggtcttaacagcagcagcatgactgcttcaacctcctctagtacccaaaattcttctact
cctctctttgctggctggaatgctgcaaagagcacctttcagtttggagggtcattgtct
acagctgcctcctctggaattagcactagtaccacgactaacagcaccaatactacttta
cagtttggtgctttaaaaccagcaccaactgcaccgcagaacacattcacctttggccaa
agcccagccaccacctcttttacagggtttggtatgcccaacaatgctaaccctatgaca
aacaccccatcgacccaggccacgtttggtagctcagcattcagcccctccacgtgcttt
gctaacccacaatctcaagctcctactccagtcaagccttttacgtttggagccagtgct
ggaggaggtactgcagccacaccacttgcattcggcacacccgctagtacagctgcacca
acatttggaaattctacacagtctgcatttggtggaacgtccacagcctttgcctttggg
aacacaagtactgtaccagtgagtgctgcctctatgcccgctcctgccttcaagtttgga
gcagcacaagccgcacagcagaattcaactgcaacttctggagggttcaattttaccaca
ccactttccggagcacagtttgggacacctacacaaacagggcaaaatcaagggttctca
tttggagcaggcaacacagataatgaatctgcttttggaacttccacctctggatatggt
gctgcaagtggccccagtccatttggcagccctgggactcctgtagggggatttggtgcc
tcagcctttggcactccttcagccacattttcaattggtgcttgttcaaagcctagcggt
tcacgacaaaggcttcaggctcgcagacagcacacaaggaagaagtaa
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