Silurus meridionalis (southern catfish): 124394149
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Entry
124394149 CDS
T08004
Symbol
zgc:162872
Name
(RefSeq) LOW QUALITY PROTEIN: BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124394149 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124394149 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124394149 (zgc:162872)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124394149 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124394149 (zgc:162872)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124394149 (zgc:162872)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_5
Ank_4
BAR
DUF2383
Motif
Other DBs
NCBI-GeneID:
124394149
NCBI-ProteinID:
XP_046718209
LinkDB
All DBs
Position
12:3278409..3288222
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AA seq
691 aa
AA seq
DB search
MDYFLDFEECIRDSPGFRLSLERCENDLEQLESRMEKVMRSCNKTVEDGQVFCSSNQLFI
SALAELTSHHKNNTVIENCLQQFNQALQEMIHFHMMLLDQTRRAITQQLTNLLTQFLPPL
RDARCECVRIRDELNTALVKSAQVPQHKVAEAERHTHLLLATRKCYTHCSLDYCLQLNNF
LTQQKVDVLNSVFSFCHAQNTFFHQGFDLLKDLEPTMKTMAAELSGLSAECVNRRKNLEH
QHLLVQQRDACGEPVLFNGGAIEGYLFKRPRRKNKTWKRCWFSANHNQLIYTKSHKEQPI
VLFDDLRLCAVKSLDSIDRRFCFELLSVQKSCVLQADSEELKMAWMNAVQSRIDMAYRER
VQSEHTQVKDGSLPAPAPVPTPLPGTLSMVLXSHGNHRCCDCEEAEPRWASVNLGITVCI
ECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINGIYECHLPEMEKPKSDSSR
QQKEVYIRTKYVERKFVQRCDPNITDTVQQWAGQRLYDAAVSGDVVSMALALAQGGDVNW
SNPEGQTPLIGAAIGGSLLACEFLLQNGXNANHRDQHGHAAIHTATTRGHTGQVCLLLKR
GANQYAADEKGKDPLSIAVETAHADIVTLLRMARMNEEMRESEGFFGSVGDDETFQDIVR
DFSNMASHDPEQLLRRHFGTQDESQEEPQKS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggattacttcctggattttgaagagtgcatccgggactctccgggcttcaggctatct
ttggagcgctgtgagaatgacctagagcagctggaaagtcgcatggagaaggtgatgagg
tcgtgtaataagacggtggaggacggtcaggtcttttgttcgtccaatcagctcttcata
tccgctttggccgagctcacgtcccaccataaaaacaacactgttatagagaattgtctg
cagcagtttaatcaggctctgcaggagatgatccacttccacatgatgctgcttgaccag
actcggagagcgatcacacaacaactcacaaatctactgacgcagttcctcccaccgctg
cgtgatgctcgctgtgagtgtgtgcggatcagagacgagctgaacacggcgctggttaaa
agcgctcaggttccacagcacaaagtggctgaagctgagcgacacacacacctgctgctc
gcaacacgcaagtgctacacacactgcagtctggactactgcctacagctgaataatttc
ctgactcagcagaaggtggacgtcctgaactcggttttctccttctgtcatgcacagaac
acgtttttccatcagggctttgacctactgaaagacctagagcccactatgaagaccatg
gcagctgagctgtctggactctcagctgaatgcgtgaacagaaggaagaacctggaacat
cagcacttgctcgtccagcagagagatgcctgtggggagcctgtgctgttcaacggaggt
gcgattgaaggatacctgtttaaacgtccgcggaggaaaaacaaaacctggaagaggtgt
tggttttcagcgaatcacaatcaactgatttacacgaaatcacataaggagcagccgatt
gtgctgttcgatgatctccggttgtgcgctgtaaaatctctagactcaatcgatcgccgt
ttctgtttcgagctgctgtcggtgcagaagagctgtgttttgcaggcagactcagaggag
ttgaaaatggcatggatgaatgcagtgcagagccgcatagacatggcttatagagagaga
gtgcagtccgaacacacacaggtaaaggatggctctcttcctgctcctgcgcctgttccc
acccctttacctggcactctaagcatggtcctcngtagccatggtaaccaccgctgctgt
gactgtgaagaagcggagcctcgctgggccagtgtgaacctcgggataacagtgtgcata
gagtgttccggtatacacaggagtctcggtgtacatctgtctaaggttcgctctctcacc
ctggattcttgggaccctgaacagctaaagctattgtgtgttctgggtaatgatgtcatc
aatggaatttatgaatgccacttgccagagatggagaaacccaagtctgatagctctcgg
cagcagaaggaggtgtatatccgaacaaaatatgtggagaggaagttcgttcaacgttgt
gaccctaatatcactgacacagtacagcagtgggcggggcagagactctatgatgctgca
gtaagtggggacgtcgtctccatggctctggctctggctcaggggggcgacgtgaactgg
agtaacccagagggacagacgcctctgattggtgcagcaattggcggctcgttattggcc
tgcgagttcctcttgcagaatggcngcaatgccaatcacagagatcaacacgggcatgca
gccatacacacggctacaacccggggacacacagggcaagtgtgtctgctgttgaagcga
ggagccaatcagtacgcggcagacgagaagggaaaggacccacttagtattgcagtagaa
acggctcatgccgacatcgttactctgttgagaatggcccgtatgaatgaagaaatgagg
gagtctgaaggatttttcggatcagtgggggacgacgagacgtttcaggacatcgtccgc
gattttagtaacatggcatctcatgatccagaacagctgttgcgcagacacttcggcact
caggacgaatcacaggaagaaccccaaaagagctga
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