Silurus meridionalis (southern catfish): 124394702
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Entry
124394702 CDS
T08004
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124394702 (tyw1)
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
124394702 (tyw1)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124394702 (tyw1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Ntox4
FMN_red
Motif
Other DBs
NCBI-GeneID:
124394702
NCBI-ProteinID:
XP_046719063
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Position
12:complement(6244882..6324200)
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AA seq
736 aa
AA seq
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MFFITLLAKCLCFVSADDMSGSLDNAWSYAEAFFWSVWHKRLYVYTVAALIIGLWLTVNM
IMKKKKPNNPGKTPETGFKTDKQIAEKEKSVNVAGVKIFYGSQTGTAKGFVRELAEEVQA
LGFQSDVIDLKDYDPEDKLSDECTSKMICVFLMATYTEGKPTESAEWFCKWLEEASTDFR
YGKTYLKGLRYAVFGLGNSVYVGYYNTVGKNVDKWLWMLSATRIMSRGEGDCDVSKSRNG
SIQADFQAWKEDFLRRLQALAKGEKKTCNCECKKGSCKSKKKHHEKAEGEKHSSEELFES
SSEAESGGEVEKDHGSVIDLEDLGNVMNHIKKAKKKGEDDLSKMNGLKKTEPEEERREMV
TPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLAC
ANKCVFCWRHHTNPVGTEWRWKMDPAEKILQEALENHRNMIRQFRGVPGVRSDRFEEGLA
VKHCALSLVGEPIMYPEINSFLHLLHQCHISSFLVTNAQFPKEIRNLVPVTQLYVSVDAS
TKDSLKRIDRPLFKDFWQRFLDSLKALGEKQQRTVYRLTLVKAWNVDEMKAYAELIALGQ
PDFIEVKGVTYCGESSASNLTMANVPWHEEVVHFVQQLGNLLPDYDIACEHEHSNCLLLA
HHKFKVDGEWWTWIDYERFHELIQQYNESSGTKTFTALDYMAKTPSWAVFGAQERGFDPS
DTRFLRKNKTKDISGC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttctttataaccctgttagcaaaatgtctgtgttttgtatcagcagatgacatgtca
gggtctttggacaatgcctggagttatgctgaagctttcttttggtccgtgtggcacaag
agattatatgtgtacactgtagctgcactaatcatcgggttatggttaacagtgaacatg
atcatgaaaaagaagaagccgaacaatcctggaaaaaccccagaaaccgggtttaagact
gacaaacaaatagctgaaaaggaaaagagtgtcaatgtagcaggtgtaaagattttctac
gggtcacaaactggaaccgcaaagggttttgtcagggagcttgcagaagaggtccaggcc
ctggggttccagtcagacgtgattgacttgaaggattacgaccccgaagataaactgtca
gatgagtgcaccagtaaaatgatttgtgtgttcctcatggccacatacaccgaaggcaag
cccaccgagagcgccgagtggttctgtaaatggttggaggaggcgtctactgactttcgc
tacggcaaaacctacctgaaaggtctgcgatacgccgtcttcggcttggggaactctgtt
tacgttgggtattacaacacggtgggcaaaaacgtggacaagtggctgtggatgctgagt
gcgacgcggatcatgagtcggggcgagggcgactgcgacgtctcgaaaagccggaacggc
agcattcaggccgacttccaggcgtggaaagaagatttcttgagacgccttcaggccctg
gctaaaggtgagaagaagacgtgcaactgcgagtgtaaaaaaggctcgtgcaagagtaaa
aagaagcaccatgagaaagccgagggtgaaaagcacagctctgaggagctgttcgagtcc
agcagtgaggccgagtctggaggtgaggttgagaaagatcacggctctgtcattgaccta
gaggatcttggaaatgtcatgaaccacatcaagaaagccaagaaaaaaggggaggacgac
ctgtccaaaatgaatggattgaagaagactgagcctgaggaggagaggagggagatggtc
actccagcactgagagaagcgctgactaagcaaggctacaaactcataggtagtcactct
ggggtaaagctgtgccgttggaccaagtcaatgctgagagggagaggaggatgctacaaa
cacacgttttatggcatcgaatctcaccggtgcatggagaccactcccagcctggcctgt
gccaacaaatgcgtgttttgctggaggcaccacacgaaccctgtaggcaccgagtggcgt
tggaaaatggaccccgctgaaaagatcctccaagaagcactggagaaccaccgcaacatg
atccgccaattccgaggtgtcccaggagttcggtcggatcgttttgaggagggtttggca
gtaaagcactgcgctctgtctctagtgggcgagcccattatgtacccagagatcaactcc
ttcctgcatctcctccaccagtgccacatctccagcttcctggtcaccaatgcccagttc
ccaaaagaaatcaggaacctggtgccagtcacccagttgtacgtgagtgtggacgccagc
accaaggacagcctgaagcggatagatcgtcctctattcaaagacttctggcagcgcttc
ctagacagtcttaaagcccttggggagaagcaacagcgcacagtataccgtctgaccctg
gtgaaggcctggaacgtcgacgagatgaaagcctacgccgagctcatcgccctgggccag
ccagacttcatcgaggtcaagggagtaacctactgtggtgagagctcagccagcaatctg
accatggcaaacgtgccctggcatgaggaggtggtccactttgtgcagcagctcggcaac
ctcctgcccgactacgacattgcctgtgaacacgagcactcaaactgcctgttactagcc
caccataagtttaaagtggatggtgagtggtggacgtggatcgactacgagcgcttccat
gagctcatccagcagtacaatgagagcagcggtaccaagaccttcaccgctctggactac
atggccaagacgcccagctgggccgtgttcggagctcaggagagaggcttcgatccctca
gacacgcgcttcctgagaaaaaacaagaccaaagacatctccgggtgctaa
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