Silurus meridionalis (southern catfish): 124396939
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Entry
124396939 CDS
T08004
Symbol
cabp5b
Name
(RefSeq) calcium-binding protein 5b
KO
K23531
calcium-binding protein 1/2/4/5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124396939 (cabp5b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124396939 (cabp5b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
124396939 (cabp5b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
EF-hand domain-containing proteins
Calcium binding proteins
124396939 (cabp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EF-hand_4
DUF5580_M
Dockerin_1
SPARC_Ca_bdg
Ribosomal_L27A
DUF4194
DNTTIP1_dimer
Motif
Other DBs
NCBI-GeneID:
124396939
NCBI-ProteinID:
XP_046722295
LinkDB
All DBs
Position
14:8806281..8816218
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AA seq
182 aa
AA seq
DB search
MFTQSMSHGPGGSGVLLGPACIFLRGKNIERKLVAEEIEELRQAFIEFDKDKDGFISCKD
LGNLMRTMGYMPTEMELIELSQNINMNLGGQVDFEDFVELMTPKLLEETAGMISLKELKE
AFREFDMDGDGVITIDELRHAMKKLLGENTNRKEIEAVVREADNNGDGTVDFEEFVQMMS
QH
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacaatccatgtctcatggcccgggggggtcaggtgtgcttcttggcccagcc
tgcatctttctgagagggaagaacattgagcggaaacttgtagctgaagagatagaagag
ttgcgacaggcctttatcgagtttgataaggataaagatgggttcatcagctgtaaagac
ttgggcaacttgatgcggaccatgggatacatgcccacagaaatggaactgatcgagctc
agccagaacatcaacatgaaccttggaggccaagtagactttgaggattttgtggaactc
atgactcctaaactcttagaagagacagctggaatgattagcctaaaggagctaaaggaa
gcatttcgagagtttgacatggacggtgatggcgtcatcactattgatgagctgaggcat
gcgatgaagaaactgcttggggaaaacaccaacaggaaggagattgaagctgtggtcagg
gaagctgacaataatggagatggaacagtggattttgaagaatttgtccaaatgatgtca
caacattaa
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