Silurus meridionalis (southern catfish): 124397760
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Entry
124397760 CDS
T08004
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124397760 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124397760 (dkc1)
03032 DNA replication proteins [BR:
smeo03032
]
124397760 (dkc1)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
124397760 (dkc1)
Prokaryotic type
124397760 (dkc1)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
124397760 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
DUF908
Motif
Other DBs
NCBI-GeneID:
124397760
NCBI-ProteinID:
XP_046723466
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All DBs
Position
15:23346369..23354227
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AA seq
517 aa
AA seq
DB search
MADGEISSAKKEKKKKKAKVSDEEIGDIQETGDFLIKPESKVVKLDTSQWPLLLKNFDKL
NIRTAHYTPLPHGSNPLKRNINDYVRTGFINLDKPANPSSHEVVAWIKRILRVEKTGHSG
TLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNALESEHQLARALECLTGALFQ
RPPLIAAVKRQLRVRTIYESKLIEYDQEKRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQ
MQELRRVRSGVLGEKDCMVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLISYKRIVMK
DSAVNAICYGAKIMLPGVLRYEDGIEVNGDVVVITTKGEAICAAVALMTTAVISTCDHGI
VAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKRGKPNGSTPAEWKEGYVDYSNK
PKKAAAEDGDATQASAKRKRDESGSEGEAAPSTPKTEEMEKKEKKKKKKEKKLKVAEEET
EEAQATEEVAAEEEAEVTESAKKKKKKKVKEAADDSE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgaaatttcttctgctaagaaagagaagaaaaagaagaaagcgaaggtt
tcggatgaagaaatcggggacatccaagaaactggggatttcctaatcaaacctgaatcc
aaggttgtcaaactcgacacgtcccagtggcctttgctgctgaagaacttcgataagctg
aacatcagaactgcacactacacaccgctaccacatggatcgaatcccctgaagaggaac
attaatgattatgtcaggaccgggttcattaacttggacaagccggcgaatccgtcctct
cacgaagtggttgcgtggatcaagcggatcctgcgcgtggagaagaccggccacagcggg
acgctcgaccccaaggtcacaggatgtctgatcgtgtgcgtggaccgagcgacgcgattg
gtcaaatctcagcagagcgcaggcaaagagtacgtgggcatagtacggctgcacaatgcg
ctagagagcgaacaccagctcgccagggctctggagtgtctgaccggagctctgttccag
aggcctcctctgatcgcggctgtgaagcgacagctgcgagtcaggaccatctacgagagc
aagctcatcgaatacgaccaggagaaaagactcggtattttctgggtaagctgcgaagct
ggcacgtatatcagaaccctgtgtgttcatcttggactcctgctgggagtcggaggtcag
atgcaggagctcaggagggttcggtctggagtcttgggagagaaggactgcatggtgacc
atgcacgacgtattagacgcccagtggcagtttgaccacaataaggacgagacgtacctc
aggagggtcatcttccctctggagaagctgctcatcagctacaagaggatcgtcatgaag
gacagcgcggtcaacgccatatgctacggagccaaaatcatgttaccgggtgtgttacga
tatgaagacggcatcgaggtgaacggggacgtcgtcgtcattaccactaagggagaggcc
atttgtgcagcggtggccctgatgacgacggcggtcatctccacgtgcgatcacggcatc
gtcgcgaagatcaaaagagtcatcatggagagagacacgtatccacggaaatggggcctg
ggtccaaaggcaagtcagaagaagatgatgatccagaaaggtctcctggataaacgcggc
aagccaaacgggagcactccggccgagtggaaggagggatatgtggactacagtaataaa
cctaaaaaggctgctgctgaagatggtgatgctactcaggccagtgcaaagaggaaacgc
gacgagagcggaagcgaaggtgaggccgcaccatcgaccccgaagacggaggagatggag
aagaaagagaagaagaaaaagaagaaggaaaagaaattaaaggtggctgaggaggaaacc
gaggaagcacaagccacagaggaagtggcagcagaagaggaagcggaggtcacagaaagc
gccaagaagaagaagaagaaaaaggtgaaagaagccgcggatgattcggaatga
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