Silurus meridionalis (southern catfish): 124397864
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Entry
124397864 CDS
T08004
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124397864 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397864 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
smeo04091
]
124397864 (lman1)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
124397864 (lman1)
Lectins [BR:
smeo04091
]
L-type lectins
124397864 (lman1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
ATG17_like
Flagellar_rod
Lectin_legB
Cytochrom_B562
GCN5L1
DUF4407
Motif
Other DBs
NCBI-GeneID:
124397864
NCBI-ProteinID:
XP_046723676
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All DBs
Position
15:complement(1059090..1068422)
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AA seq
504 aa
AA seq
DB search
MAVSMAKLQAAQQCLLLVSVLFHCSARGGAAGEEAPHRRFEYKHSFKGPHLTQSDGMIPF
WVHTGNAIPSADQVRITPSLRSQKGSVWTKTPVNFEHWEAEVAFRISGRGRTGADGLAIW
YTENQGLDGPVYGAADHWNGVGIFFDSFDNDGRKNNPAIIVVGNNGKLTYDHQNDGSTQA
LGTCLRDFRNKPYPVRAKITYYKKTLTLWINYGFTPGKDDYEFCAKVENMIIPSTGYFGI
SAATGGLADDHDVLSFLLFRLTEPGQNLPPPEQEIPKEEQDKYQEEFQNFQQELDKKKEE
FQKEHPDVHGQPMEDLYESVSDREVRQVFEGQNRIHLEIKQLNRQLAMILDEQRRYVSIV
SEEISKRTGNTQSGQGPSQELDTIMTNQQEVLRSLNELRNSVSASVQQLSAAQQGNTGAL
GAYESIQHFNDIKEHLHVVKRNVENIIQRNAAPPAEKQKCPDPPPPPPCLSTVHFVVFIV
VQTLLFFGYVMYKSQQEAAAKKFF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatggcgaagctccaggctgcacagcagtgtctgctgctcgtttctgtc
ctgttccattgctcggctcggggtggagcagcgggcgaggaggcgccgcatcgccgcttc
gagtataagcacagctttaaaggtcctcacctgactcagagcgacggaatgatcccgttc
tgggttcacacgggcaatgcgatcccgagcgctgatcaggtccggatcacaccgtctctg
cgcagccagaagggctcggtctggaccaaaactccggtgaacttcgagcactgggaggcc
gaggtggctttccgcatctccggccgaggaagaaccggagctgatggactggccatatgg
tacacagagaatcagggtctggatggtccagtatatggagctgctgatcattggaacggt
gtgggaattttcttcgactccttcgataatgacgggaggaaaaataatccagccatcatc
gttgtgggaaacaacggtaaactgacctatgaccatcagaacgacggttcaacccaggcc
ctgggaacctgtcttcgggatttcagaaataaaccatatcccgtccgagccaaaatcacc
tactacaagaagaccttaacgttgtggattaattacggattcacgccagggaaagacgat
tatgaattctgtgccaaagtggaaaatatgatcattccatccacaggatatttcggcatc
tcggctgctacaggaggactcgcagatgatcatgatgttttgtcgttcctgctgttccga
ttaactgagcctggacaaaacctgcctccacctgaacaagagattcccaaagaggagcag
gacaagtaccaggaggaatttcagaatttccaacaagagctggacaaaaagaaagaagag
tttcagaaggagcaccctgacgtccacgggcagcccatggaggatctctatgagagcgtg
agcgaccgtgaggtccgtcaggtgttcgagggccagaaccgaatccacctggagatcaaa
cagctgaaccggcagctggccatgattctggacgagcagcgccgctacgtctccatcgtc
agcgaggagatctccaaacgcacaggaaacacccagtcggggcagggtccgagtcaggaa
ttggacacgatcatgacgaatcagcaggaagtcctgcgcagtctgaacgagttgagaaac
agcgtttcagcgtcggtgcagcagctgagtgcagcgcaacagggaaacaccggcgctttg
ggcgcgtacgagtcgatccaacactttaacgatatcaaggagcatcttcacgtcgtcaag
aggaacgtggagaacatcatccagaggaatgcggctccaccagctgagaagcagaagtgt
cccgatcctcctcctcctcctccctgcctatccactgtgcacttcgtcgtcttcatcgtc
gtccagacgctgctgttttttggatacgtcatgtacaaaagccagcaagaagcagcagca
aagaagtttttttga
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