Silurus meridionalis (southern catfish): 124398441
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Entry
124398441 CDS
T08004
Name
(RefSeq) macrophage mannose receptor 1
KO
K06560
mannose receptor, C type
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124398441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398441
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
smeo04054
]
124398441
04090 CD molecules [BR:
smeo04090
]
124398441
04091 Lectins [BR:
smeo04091
]
124398441
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
C-lectin receptors
124398441
Pattern recognition receptors [BR:
smeo04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
124398441
CD molecules [BR:
smeo04090
]
Proteins
124398441
Lectins [BR:
smeo04091
]
C-Type lectins
Group 6: Mannose receptor family
124398441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
F5_F8_type_C
LCCL
Chordopox_A33R
UL45
Gal_Lectin
Rxt3
Motif
Other DBs
NCBI-GeneID:
124398441
NCBI-ProteinID:
XP_046724605
LinkDB
All DBs
Position
15:1564565..1591761
Genome browser
AA seq
2157 aa
AA seq
DB search
MILLFIIVFGLIHSVLGDCEEGWREYEDRCYHFSTEKKTWHEALEACAHKGSHLMSIMNL
HERTWVSTQLGHSIFWIGLNDIASEGNWEWSDGSIYYPYLEYWRPGQPDNYDDNEDCAQA
DGNSNGRWNDEHCTAQRQYICKRDNPNPPVLCDTANRWEQFGSNCYKLHHTLKKSWNSAR
SECLKEGADLVSIESAEENQYVLGLDPTYYDLWIGYSTLKCTTISCQVEENSTKFSWSDA
ATSSYTQWANQQPDLTDKQNGLCAGLIKSGDNYGKWKTHLCRSEHPYACKRALNTVCPLG
WSSFKGSCYLAVSNGRLLTSWHEALTRCSDIGASLLTIKNEEEQYFINGMLPDLHQIDIP
DVWIGVSDMDEDGTFRWVDKTNIEFSNWSPGFPKNTNKFWDCGQIYTGNYAGKWETGNCF
KVQAYICKMLGGQNVKPTPPPEFHCDQGYLLYGDHCYHFESESVKTWQDAENYCFAQNGH
LASIHNQETISFITAHVTRASWIGLSDIQQEGNFIWSDGTPSDFLPWGEGQPDNWGEEDC
VQIRGTEHFETGKFNDVQCSNTYPFICKKGKGVGPPPIPPTSGPGWNEKCGSWIADPFND
YCYHIVPYSLRKWAEARADCVHQGGDLASITEPFEQGFIQAHIQSIPTGVSLWIGAHDSV
TEGGWEWMDRSPFRYINWSPGNPDNYGSEDCLSIYINNGLWNDDNCDYRRGYICKRRGNT
PEPPPPHDGYLTAYTCEGSSMVLHCPINSVINIQSAFFGRRSDKICPYMDGSEGHCEVPG
TYDRVSKQCDNHQFCFLFSHVENDPCPLISKYLEVVYSCEQNVCVRGLGIEDGSITDSML
SASSSMGGKEPRNARLNGNTCWMPTTSENSWIQVSLPETKKITGVVIQGCPTADHWVTKF
KVQTSVDGVSWIDYMLDGKVEVFLGATDRGSPTTQLLGTPVSVKYIRILPSEWHNQAGLR
FEILGCTPDYAISCITRPNLDHYVDKMTVHCPAGCSEAIYNVYGTLTYRGDSTICAAAIH
AGVILNEVGGDCTILKAPGQNFYSGSTRNGIISKQYSGSYSVSYQFADGELRCSGNDWYE
FGEFCYKPFSEKRTWHEARAACMRQGADLVSIMSLTEQSWLESYLYLATSDVWTGLNDLE
FSGYFTWSDKHEVRFTHWAPGEPNNHLGFKEDCVEMLHQTGRWNDVTCTELNTYICKMPK
GHYPLPSIKPTVYGCLQGWDAFEYSCYWFEETPMTRAEAKAFCDSKSSTLLHILDVYEQA
HFTAFLSAYSGNWWIGLRAKGELGGVDYQWDNGASLLYTHWDRDYPDNSKGDCVTMTTKP
IAGFWRNQNCDHSHPFVCESPRDGISPPTHAPTPPPVAGCANGWSGQPHFRQCYRLFTVD
FSNKKSWADAREDCLSRGADLVSIHNVEEERFIADYTKGKTQWIGLSQEPTAGGYHWSDG
SPVTHTNWDNGEPNDHGGRENCVEMITTINGTSFWNDQTCDAPQDWVCMIAKGKTPLIPP
VPPPPIPAPDCGDNPGWRKNNGLCYYYNDTDIVDFHTALARCYAEKALLASILDQQEQTY
VVSMVGTGKIDAAWIGLRMFGVVGGEFLWVDGSPVTYVHWAPGEPNNAGGEEQCVQMKRY
PGTWNDVNCGRAIAGYVCKKLPGDHHTPPPPTPAWEGNCPDGWLRFHNKCYMIRGRHSHQ
EERANWTYARDWCKKQGGDLAVIDDINENEFVASYLRDVSHATWIGLSDRLHEGKFAWSD
GVSPVLFTNWAEKEPNNNNGEEHCVSMSHNHRVTGRWNDEKCEEKRSWVCYKKKSSSLPP
PAPTSSPCHSDYISWYKNCYKLVSEPKPWDEAQDACVKEGGNLASVDMSYDQAFISAVLQ
QNKQDTWIGLRRKENEGTYRWSDGWPVFYTHWGPGEPTNHDGEGCVSMHGRSHFIQGTWN
DTDCKVAKPYLCKISHEPPPPTPPSGDGECLPYWQAYGSYCYIVYNDKQGRSWPEARHFC
QLISETDLASVHSRAEVEFLTSINNTGLHHLWLGLSRDISYGWAWTDLSSLGFTNWAQGE
PNGGGHDGAREDCVEMYKDGKWNDNSCFEKRGFICKRRQHYSHGNTTTVSPILPPAASVA
GAVIGALLAVVIVLGVLYYIFRVKGVKLSSVSLPSRSKNNVEVPAFHNPNFAGESET
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgctctttattatagtgtttggtctcattcattctgtgctgggagattgtgag
gaaggatggagggaatacgaggacaggtgctaccatttctccactgaaaagaagacatgg
catgaggctctggaggcatgtgcgcacaaaggaagtcatctgatgagcatcatgaacctt
catgagaggacgtgggtcagtacgcagcttggacactctatattctggatcggcctgaac
gatatcgcctctgaggggaactgggagtggagcgatggcagcatttattacccatatcta
gaatactggaggcccggacagccagataactatgacgacaacgaggactgtgcacaagcc
gatgggaacagcaacggccgttggaacgatgagcactgcacagcccagcggcaatacata
tgcaaacgagacaacccgaaccctcctgtgttgtgtgacacggccaaccggtgggaacag
tttggttctaactgctacaaactacaccatactctaaagaagagctggaactcggcccgg
agcgagtgtttaaaggaaggagccgatctggtgtccatcgaatcagcagaagaaaaccag
tacgtcctaggtctggacccgacctattacgacctgtggattggctactccaccctgaaa
tgcaccacaatatcatgtcaagttgaggaaaacagcaccaagttcagttggtctgatgcg
gctacctccagctacacacaatgggccaaccagcaacctgatctcaccgataagcagaac
ggcctgtgcgctggtctcatcaagtcaggagataattacgggaagtggaagactcacctg
tgtcgctctgaacatccgtacgcgtgcaagagggctttaaacaccgtttgcccgctcggc
tggtcgagctttaaaggaagctgctatttggcggtgtctaacggccgcctgttgaccagc
tggcacgaagctctgaccagatgcagcgacataggcgctagtcttctgaccatcaagaat
gaggaagaacaatacttcatcaacgggatgcttccagatctccaccagattgacattccc
gacgtgtggatcggcgtttcagatatggatgaggatggaacgtttagatgggtggataaa
accaatatcgagttttccaactggagccccggtttcccgaagaacacgaataagttttgg
gactgcggacagatttatacagggaattacgctgggaaatgggagacaggaaactgtttt
aaggtccaggcgtacatctgtaagatgttggggggtcagaacgtgaaacctactcctcca
ccggaatttcactgtgatcaggggtatcttctgtacggtgatcactgctatcacttcgag
agtgaatcggttaaaacatggcaggatgctgagaactactgcttcgctcagaacggacac
ctggccagcattcacaaccaggagacaatcagttttataacagctcacgttaccagagcc
tcctggatcggactcagtgacatccaacaagagggaaactttatatggtctgatggaaca
ccttctgatttcttgccatggggcgagggtcagccggataactggggcgaggaggactgt
gtacaaatccgtggcacggagcacttcgagacaggaaaatttaacgatgtacagtgttct
aacacctacccgttcatctgcaagaaaggtaaaggtgttggtcctcctccaattccaccc
acctctggaccaggttggaatgagaagtgtggttcatggattgctgacccctttaatgat
tactgctatcacatcgttccgtactcactgcgtaaatgggctgaagctcgtgctgactgt
gtgcatcagggaggcgaccttgccagcatcactgagccatttgagcagggctttattcag
gctcatatccagtccattcccacgggtgtgtctctgtggatcggtgctcatgactcggtc
acagagggaggatgggagtggatggacagatctcccttccggtatattaactggtcccca
gggaacccggataattacggcagcgaggactgcctctccatctacatcaacaacggcctg
tggaacgacgacaattgcgactatcggcgaggctacatctgcaaacgccgcggaaacaca
ccagaacctccaccacctcatgatggctacctgacagcgtacacatgtgaaggctcctcc
atggtcctccactgtcccataaacagtgtcatcaacatccagtctgctttcttcggccgc
cgcagtgacaaaatctgtccttacatggacggaagtgaaggccactgcgaggtcccggga
acgtacgatcgcgtcagtaagcagtgtgacaaccatcagttctgtttcctcttctcacac
gtggaaaacgacccgtgtcctttaatttccaaatacctggaggtggtgtacagctgtgag
cagaacgtgtgtgtaagaggtttaggaatcgaagatggcagcattacagactcgatgctc
tctgcttcttcatcgatgggggggaaagaacccagaaatgctcgactcaatggaaacacc
tgctggatgcctaccaccagtgaaaattcttggatccaggtgagccttcctgaaacgaag
aagatcacaggggttgtgatccaaggctgccccactgctgatcactgggtgaccaagttt
aaagtccagaccagcgtagatggagtttcctggatcgactacatgcttgatggaaaggta
gaagtgtttctgggtgcgacagatagaggttctcccactactcagctgcttgggacccct
gtatctgtgaagtacatacggatcctgccgtcagagtggcacaaccaggccggcctgaga
tttgaaatcctcggctgcacccccgactatgccattagttgtataacgagacccaacctg
gaccactatgtagacaagatgactgtccactgccctgctggttgttcggaggcgatctac
aacgtgtatggaaccctgacttaccgaggggactctaccatctgcgcagccgcgattcac
gccggtgtgattctcaacgaggtcggaggagactgcaccatcctcaaagctccaggacag
aacttctacagcggctccaccaggaacggcatcatctccaagcagtacagcggctcgtac
tccgtgtcctaccagtttgctgatggagaactcagatgttcaggaaatgactggtatgaa
tttggcgagttctgctacaaacccttcagcgagaagcgaacgtggcacgaggctcgggct
gcatgcatgaggcagggggccgacctggtctccatcatgtccctgacggagcagagctgg
ctggagagctacctctacctggccaccagtgacgtctggaccggactgaatgatctggag
ttctcaggctactttacgtggtcagacaagcatgaggtgaggtttacacactgggctcct
ggagaaccaaacaaccacttaggctttaaagaggactgcgtggagatgctccatcagacg
ggtcgatggaacgatgtaacctgcaccgaactgaacacctacatctgtaaaatgcccaaa
ggccattaccctctgccctccatcaaacccacagtgtacggctgccttcagggctgggat
gcttttgagtactcttgttactggttcgaggagacccccatgacccgtgctgaggctaag
gctttttgcgatagtaaaagcagcactctccttcacatactggatgtgtacgagcaggcc
cacttcactgcatttctaagcgcttactcgggtaactggtggataggtctgagagcgaag
ggtgaactgggaggagtggattatcagtgggacaatggcgcgtcactcctctacacccac
tgggacagagactatcctgacaacagcaagggtgactgtgtcaccatgacgacgaagcct
atcgcaggtttctggagaaaccagaactgtgatcattcccatccattcgtctgcgaatcg
cctagagatggcatctcgccgcccacccatgccccgactccgccccctgttgctggatgt
gcgaatggatggtccggccagccgcacttcaggcagtgctacaggctcttcacagtggat
ttttcaaacaagaaaagctgggctgatgctcgagaggactgtttgtcccgtggagccgac
ttagtcagcattcataatgtggaagaggaaaggtttatagctgactacaccaaagggaag
acgcagtggattggtttaagccaagagcccacagctggaggttaccactggagtgacggt
tcgcccgtcactcacaccaactgggataacggcgagccgaacgatcatggtggccgggag
aattgcgtggagatgatcaccacgatcaacggcacatccttttggaatgaccagacctgt
gatgcccctcaggattgggtgtgcatgatcgccaagggaaagacgccactaatcccccct
gtgcctccgccacctataccagcccctgactgtggagacaatcccggctggaggaagaac
aacggcctctgctattactacaacgacacagacattgtggacttccacacggctcttgcc
aggtgctatgctgagaaagcactgctcgcctccatcctggatcagcaggagcagacgtat
gtggtgtccatggttggaacaggaaaaatcgacgcagcgtggatcgggttgcggatgttt
ggagtcgtaggaggagagtttctgtgggtagacgggtctccggtcacatacgtgcactgg
gctccaggagaacctaacaacgctggtggagaggaacagtgtgtgcagatgaagagatat
ccaggcacgtggaacgacgtgaactgcgggcgggccatcgcaggttacgtgtgtaagaaa
ttgcctggagatcatcacactcctcctcctcctacccctgcatgggaaggaaactgccct
gatgggtggctgcgatttcataacaagtgctacatgatcagaggaaggcattcgcaccaa
gaggaaagagccaactggacttatgcacgagactggtgcaagaaacagggtggagacctc
gctgtcatcgacgacatcaacgaaaacgaattcgtggccagttacctgagagacgtgagc
catgcgacgtggatcggattgtccgatcggcttcacgagggaaagtttgcttggagtgat
ggagtgagtcccgtcctgtttaccaactgggctgagaaggaacccaacaacaacaacggc
gaggagcattgcgtgtctatgagtcataaccaccgagtgacaggtcgctggaatgacgag
aagtgcgaagagaaaagaagctgggtgtgctacaagaagaaatccagcagtcttcctcct
ccagctcccacaagcagcccctgtcactcagactacatctcctggtacaagaactgctat
aagctggtgtcggagccgaagccgtgggacgaggcgcaggacgcttgtgtaaaggaagga
ggaaacctggctagtgtggacatgagctacgaccaggccttcatctctgcagtgctgcag
cagaacaagcaggacacctggatcggcctgagacgcaaagagaatgagggaacgtaccga
tggtccgacggatggccggtgttctacacacactggggtccaggagagccgaccaatcac
gatggagagggctgtgtgagcatgcacggccgatcccacttcatccagggcacgtggaac
gacacggattgcaaagtcgctaagccgtacctctgcaagatctcacacgagcctcctccc
ccgacgccgccttctggggacggagagtgtttgccctactggcaggcgtacggaagttac
tgctacatcgtgtataacgataagcagggtcgctcctggcccgaagcgcgacacttctgc
cagctgatctcagagactgacttggcgtctgtgcacagcagagctgaggtggagtttctc
accagcatcaacaacactggacttcaccacttatggctcggcctctccagggacatctca
tatggctgggcctggaccgacctgagctctctgggtttcaccaactgggcccagggcgag
ccgaacggcggcggacacgatggggctcgagaggactgcgtagagatgtacaaggacggg
aaatggaacgacaacagctgcttcgagaagagaggcttcatctgcaaacgacgccaacat
tattcgcatggaaacactaccaccgtttctccgatccttcctcctgcagcatcagttgcc
ggggctgtcatcggggcattgttggccgtggtgatcgttctgggcgttctgtactacatc
ttcagggtgaaaggagtgaagctgagcagcgtcagtctcccgagcagaagcaaaaataac
gtggaagtgccagcgttccataacccgaacttcgccggagaatcggagacatga
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integrated database retrieval system
