Silurus meridionalis (southern catfish): 124398992
Help
Entry
124398992 CDS
T08004
Symbol
eif4ba
Name
(RefSeq) eukaryotic translation initiation factor 4Ba isoform X1
KO
K03258
translation initiation factor 4B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124398992 (eif4ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124398992 (eif4ba)
03012 Translation factors [BR:
smeo03012
]
124398992 (eif4ba)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124398992 (eif4ba)
mRNA cycle factors
Stress granule specific factors
124398992 (eif4ba)
Translation factors [BR:
smeo03012
]
Eukaryotic type
Initiation factors
eIF-4
124398992 (eif4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
124398992
NCBI-ProteinID:
XP_046725554
LinkDB
All DBs
Position
16:5855456..5876714
Genome browser
AA seq
620 aa
AA seq
DB search
MAASAKKKGKKGKTLTLTDFLAEDSGGNHIPSYAPPKPTSWADETDDLEGDVTTSWHTEE
DVYRAPPIDRSILPTAPRAAREPNIDRSRLPRCPPYTAFLGNLPYDVTEDSIKSFFHGLS
ISAVRLPREPSNPERLKGFGYAEFDDVESLLQALSLNEENLGNRRIRVDIADQSNEKERD
DRSMSGRDRNRSSDMGPDKTDSDWRARPSGDTDEGPRRDDSYGERSRDRYDSDRYRDGPR
RDNDRYDSGRDRYRDRYDDRDRRDYDRGYDSRGGGRRPFGSGFRRDYDDRRDDYRGSGDR
GDRGDRSDRGDRYGDRYGDREDRYEKREDRGPTQRPKLNLKPRSVPKEEDKSSTHSTASS
RSASIFGGAKPVDTASKEREVEERLKKEQERLQRQLEEDKGRGPERKPRERHPSWRSEDQ
ATERSRTGSESSQPGNSTSRGSRRRESERSLENEVFSSRDDEPPSPSSSRQDGLPLKVVP
APPPKENAWAKRGALSSGSAENELKSGPPKSSTSSTDDRVPQKVKDENRGDGPRRGRGGA
TAPAAGRNRRKETDRMDARRDRDLRPAPEPKKFEESPSPKFSSASKYAALLMDGEQGDDA
EENGEREFCCRKFGHKQIMN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcagctaagaagaagggcaagaaggggaagaccctcacccttactgatttc
ttagcagaggacagtgggggcaaccatataccgagttatgcgcctccaaaacctacaagc
tgggcagatgagactgatgacctggagggagatgttactacctcctggcacacggaggaa
gatgtgtatcgtgcgccacccatcgatcgctcaatcctgcccacggcaccccgtgctgct
cgtgagcctaacattgaccgctcgcgtttgccacgttgcccaccatacactgccttcctg
ggcaacctgccttatgacgtgaccgaggactctatcaagagcttttttcacggtctcagt
atcagtgcagtgcgtctcccacgagaacccagtaatccggagcgactgaaaggctttggc
tatgcagagtttgatgatgtggagtctctgctgcaagcactcagtctcaatgaagagaac
ttggggaatcgtcggattcgggtggacattgcagatcagtctaatgagaaagagagggat
gatcgttcaatgtcgggtcgagaccgtaatcgtagcagcgacatgggacctgacaaaact
gactcagactggagagcaaggccaagtggcgacacggatgaaggaccacgccgagacgat
tcgtatggagaacgatcccgagatcggtacgactcggacagataccgcgatggaccacga
cgggacaacgaccgctacgacagtggtagagacagataccgggatcgctatgatgaccgg
gaccgcagagactatgatagaggttatgactctcgtggtggaggtcgtcgtcctttcggc
agtggcttccggcgtgattatgatgatcggcgggatgactatcgtggtagcggcgatcgg
ggagatcgtggtgataggagtgatcggggggatcggtatggagatcgctatggtgaccgc
gaagaccgatatgagaaacgtgaggacagaggccctacccagaggcccaagttgaacctg
aagccgcgcagcgttccaaaggaggaggacaagagcagcactcattcgacagcctctagt
cgatcagcttccatcttcggaggggccaaaccagtagatacggcttctaaggagcgggag
gtagaggagagacttaagaaagagcaggagaggctgcagagacagctggaggaggacaag
gggagaggacctgaacgcaagcctagagagaggcatcccagttggcgaagtgaggaccag
gcaacagagcgctcacgaacaggaagcgaatcatcgcaaccaggaaacagcactagcaga
ggttcaagacggcgagaaagcgagcgctctttggagaacgaggtttttagcagccgtgac
gatgagccaccctctccctcatcgtccaggcaggatgggcttcccctgaaggtggttcca
gccccgccccctaaagagaatgcctgggcaaagagaggtgccttgagcagtggctctgcc
gagaacgagctgaaatctggtcctcccaaaagctctacaagctcaactgatgatcgagtt
ccccagaaagttaaagatgagaacaggggtgatggtccacgtcggggccgcggcggagct
acagctcctgcagcagggagaaaccggcgcaaggaaacggacagaatggacgcgagaaga
gaccgagatctcagaccagcaccagagccaaagaaatttgaggaatctcccagtcctaaa
ttcagctcagccagtaaatacgcagccttactaatggacggcgagcagggagacgatgct
gaggagaacggagaaagagagttttgctgcaggaaattcggtcacaaacaaattatgaat
taa
DBGET
integrated database retrieval system
