Silurus meridionalis (southern catfish): 124401044
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Entry
124401044 CDS
T08004
Symbol
plxna4
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-A4
KO
K06820
plexin A
Organism
smeo
Silurus meridionalis (southern catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
TIG_2
Sema
PSI
TIG_plexin
DUF948
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
124401044
NCBI-ProteinID:
XP_046728909
LinkDB
All DBs
Position
18:complement(3983275..4300417)
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AA seq
1904 aa
AA seq
DB search
MASHHRKLNSLLVSCCFFVFLLPFSTSRPQQPSIASQVDEHYRTFHAENPEWTFNHLAVD
YRNGNVYLGAVNRIYKLSQELDVLLSHQTGPEEDNRNCYPPXIVQPCSEALTLTNNVNKM
LLIDYRANRLLACGSLYQGICKLLRLDDLFKLGEPYHKKEHYLSGVNESDSVFGVIVSYG
DSSPDKLFVATAVDGRPEYFPTISSRKLARNSEEDGMFAYVFHDEFVASMIKIPSDTFTV
VPDFDIYYVYGFASGNFVYFLTLQPEMGGGPATGSSSANREQVFTSKLVRLCKDDTAFNS
YVEVPLGCVKGGVEYRLLQAAYLSKAGAILARSLGVGPDDDILYAVFSKGQKRRPKETSQ
ESALCVFALKEINERIKDRLQSCYKGEGTLDLAWLKVKDIPCSSALLTIDDNFCGLDMNA
PLGVSEMVRGIPLFSESNDKMTSVIAYVYKNHSLAYVGTKSGRLKKIRVDGPSQGAFQYE
TVQVVESGPVLRDMAFSADQHFLYVMSDTQLTRVPVEACEQYSSCNECLGSGDPHCGWCV
LHSMCTRKEKCERSSEPRRFTSDIRQCVRLSVHPSNISVSQYSVTLVLEAHNVPELSAGV
NCTFEDLAEMDGLVEGNRITCSSPAEKEVPRIIVDQGDHQIVQLYLKSKETGLAFANTSF
VFYNCSVHKSCLSCVGSPYQCHWCKYRHICTHDPRSCSFQEGRVKQPEECPQLLPADRIL
VPVNVVKPITLRAKNLPQPQSGQRGYECVLIIQGVEQRVPALRFNSSSVQCQNTSYLYDG
MEMSSLAVELTVIWNGDFSIDNPAQNKVHLYKCDARRESCGLCLKADPLFGCVWCKAEKR
CTLKQHCSHPQSMWLEHNGINSKCTHPKITKITPLRGPREGGTLVTIRGENLGLEFYEIQ
GNVKVAEVECTPIPEGYIPAEQIVCEMGKAESSQFAGNVQVCIGECQSEFMVKSSKYYYF
VLPRLHSLKPSRGPLSGGTIVNITGSNLDSGSNVSILFNGEKCTYHRRGGQWITCRSHAS
TQGTGKVTVSVYVDKAHIHKDLQFEYVEDPTITKIDPEWSIFSGNTPVTVTGTNLDIIQN
PQIRARYNKQETTNFCQVLSSTTMLCQAPALPGGLSRQKEVVEKPDEFGFILDNVQAVLA
LKNINFLYYPNPVFEPLSASGVQELKPGSPIILKGRNFLPLTPGGNGKLNYTVLIGEKPC
ALTVSDTQLLCESPNLTGRHKVLARVGGIEFSPGVVHITSDSPLSSTAIISIAGAGCLLI
LFIIIVLIAYKRKSRESDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSDLDGA
GIPFLDYRTYTMRVLFPGIEEHPVLKDLEVPGYRQEQVEKGLKLFGQLINNKVFLLTFIR
TLESQRGFSMRDRGNVASLIMTVLQSKLEYATDVLKHLLSDLIDKNLESKNHPKLLLRRT
ESVAEKMLTNWFTFLLYKFLKECAGEPLFSLFCAIKQQMEKGPIDSITGEARYSLSEDKL
IRQQIDYKTLVVNCIHPDNEKSPEIQVKVLNCDTISQVKEKILDAIYKNVPYSHRQKAAD
MDLEWRQGRGVRIILQDEDMTTKIESDWKRLNMLLHYQVSDNALVALVPKQVTAYNSVNN
STVSRTSASKYENMIKYTGSPDSLRSRTPMITPDLESGVKVWHLVKNHEHGDQKEGDRGS
KMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHGIH
DPHVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHRLG
KDSPSNKLLYAKDIPSYKSWVERYYSDINKMPAISDQDMNAYLAEQSRMHMNEFNTMSSL
SEIYSYVGKYAEEIVCALEEDDGARKQRLAFKLEQVVAFMSLES
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccaccacagaaaactgaactctttgttggtttcttgctgcttctttgttttt
ttgcttcctttctccacctcaaggccacagcagccttccattgcatcccaagtggatgag
cactacagaactttccatgctgagaacccagaatggacctttaaccacttggcggtggac
tacaggaatgggaacgtgtacctcggagcggtcaaccgcatctataaactctcgcaagag
ctagacgtgctgttgtcgcaccagaccggccccgaggaggacaaccgcaactgctaccca
cccnggattgtgcagccctgcagcgaggcgctgacactaaccaacaacgtcaacaaaatg
ctcctaattgactacagagcaaaccggctgctagcctgtgggagtctctaccagggtatt
tgcaagctgcttcgcctggacgacctctttaaacttggagagccctatcacaaaaaagaa
cattacctctcaggcgtcaatgagagcgactcagtttttggcgtcattgtgtcttacggc
gactcttcccctgacaagctgtttgtggccacggcggtagacgggaggcccgagtacttc
ccaaccatctcgagtcgcaaactggcgcgcaattcagaggaggatggcatgttcgcctac
gtcttccatgatgagtttgtggcctcaatgatcaagatcccatcagacacttttaccgtg
gtgcctgattttgacatatactatgtgtacggctttgcaagtggcaactttgtctacttt
ctgactctccagccagagatgggtggtggtccagcgacgggttcatcttctgccaaccgt
gaacaggtgtttacttccaaactggttcgactttgcaaggacgacacggcattcaactcg
tacgtagaggtcccccttggttgtgtaaagggcggtgtggagtatcggcttcttcaggcg
gcctacttgtctaaggcgggtgccattcttgctcgctcgttgggtgtgggacctgacgat
gacatcctttatgccgtgttttccaaaggccagaagaggcggccaaaggaaacatctcaa
gagtccgccttgtgcgtgtttgccctgaaggagatcaatgagagaattaaagacaggctg
cagtcctgttacaaaggcgagggcacgctggatctggcctggctcaaagtgaaggatatt
ccctgcagcagtgcgctcctgaccatcgacgacaatttctgtgggttggatatgaacgcc
ccactcggggtgtccgagatggttcgcgggattccgctgttctccgagtccaacgacaaa
atgacctcggtgatcgcctacgtctacaagaaccactcgctggcctatgtaggcacgaaa
agcggccggctgaaaaagattcgggtggatggaccctcccaaggtgcttttcagtacgaa
acggtccaggtggtggagagcggcccggtcttacgcgacatggctttctcggctgatcag
cacttcctgtatgtgatgtcagacacccagctcactcgtgttccagttgaggcttgcgag
cagtattcatcctgcaatgaatgtctgggctccggggatcctcactgcggctggtgtgtg
ctgcacagtatgtgcaccagaaaggagaagtgtgagagatcatccgaaccacgtcgcttc
acctcggacatcaggcagtgtgtcaggctcagcgttcaccccagtaacatctccgtgtcc
cagtacagtgtcacgctcgtcctggaagcccacaatgttcctgagctctccgctggtgtg
aactgcacatttgaagacctggctgagatggatgggcttgtggaaggaaatcgcattact
tgcagctctcctgctgagaaggaggtcccacgcatcattgtagaccaaggtgaccaccag
attgtgcaactctacctcaagtccaaagaaacaggtctagcttttgccaacaccagcttt
gtcttctacaactgcagtgtccataaatcatgtctgtcttgtgtcggaagcccataccaa
tgtcactggtgcaagtaccgtcacatctgcacccatgacccacgcagctgctctttccaa
gaaggacgagtcaagcagcccgaggaatgcccccagctgcttcccgcggaccggatcttg
gtgccggtcaacgttgtgaagcccattaccctgcgtgccaagaacttgccccagcctcag
tcgggacagcgtggctacgagtgcgtgctcattatccagggagtggagcagagagtccct
gccctccgctttaacagctccagcgtacagtgccagaacacttcgtacttgtatgatggg
atggagatgagtagcctggccgtggaactgacggtgatctggaatggggattttagcatc
gataacccggcgcaaaacaaagtacacctgtataagtgtgatgcgaggcgtgagagctgt
ggcctgtgcctgaaggctgaccctttgttcggatgtgtgtggtgtaaagccgagaagcgc
tgcactctcaaacagcactgctctcatccacagagcatgtggctcgaacacaacggcatc
aacagcaagtgcacacacccgaagatcaccaagatcaccccgctgagaggacctcgggaa
ggagggacactggtgacaattcgcggcgagaacctcggcctggagttctacgagatccag
ggcaacgtgaaggtcgcggaagtagagtgcacacccataccagagggatacatccctgct
gaacagattgtgtgtgagatgggaaaagccgagtcaagtcagtttgccggaaatgtccaa
gtctgcataggggagtgccagtccgagttcatggtcaagtcctccaagtactactacttt
gtgctccccagactgcactctctgaagcccagccgcggccccttatccggaggaaccatc
gtcaacatcacaggaagcaacctagactccggaagcaacgtttccatcttgtttaacgga
gagaagtgcacttaccacaggagagggggtcagtggatcacatgtcgctctcacgcgtcc
actcaaggcaccggcaaagtcaccgtatctgtgtacgtcgacaaagcccacattcacaag
gatctccagtttgagtatgtagaagacccgaccatcactaaaatcgatcccgaatggagc
attttcagtggaaacacaccagtgacagtgacgggaaccaacctggacatcatccaaaac
ccgcaaatcagagccagatacaacaagcaggagacgactaatttttgccaggttctcagt
tcgaccacgatgctgtgccaagccccggcgctgcccggtggcctgagcaggcagaaggaa
gtggtggagaaacctgacgagtttggcttcatcctcgacaatgtgcaggctgtgctggct
ctcaagaacatcaatttcctgtattaccccaaccccgtgtttgagcctctcagtgcatct
ggagtgcaggaactcaaacctggatctcctattattctaaagggccggaatttcctccct
cttacccccggtggcaacggcaaactgaactacaccgttctgatcggcgaaaagccctgc
gccttaaccgtatctgacacgcagctgctgtgtgaatcgccaaatctaactggacgccac
aaagttctggcccgtgtgggtggcatcgaattctccccaggggtggtccacatcacctca
gacagccctctcagcagcacggccatcatcagtatcgctggagccggatgcctcctcatc
ctcttcattattatcgtcctgatcgcctacaaacgcaagtcgcgcgaaagcgacctgacc
ctgaaacgcctgcagatgcagatggacaacctggaatccagagtggcactggagtgtaaa
gaagcgtttgccgagctccagacggatattaatgagctgaccagtgacctggatggagca
gggatcccatttctagactacagaacctacacaatgcgagttctcttccctggcatcgag
gagcatcctgttcttaaagacctggaggtgccaggttacagacaagagcaggtggagaag
ggtctgaagctttttggtcagctgatcaacaacaaggtgttcctgctgaccttcattcgc
acgttggagtcccagcgcggtttctccatgcgagaccggggcaacgtggcctcgctcatc
atgaccgtgctgcagagcaagctcgagtacgctactgacgtcctcaaacacctgctctcc
gaccttattgacaagaacctggagagcaaaaaccaccccaaactgctgctgcgcaggacg
gagtcggttgccgagaagatgctgacgaactggttcacgttccttctctacaaattcctc
aaggagtgtgctggcgagccgctgttttccctcttctgtgccatcaagcagcagatggag
aaagggcctatcgactcgatcacaggggaggcacgctactctctgagcgaggacaagctc
atcaggcagcagatcgactacaagacactggtggtgaactgcattcacccggacaacgag
aaaagcccagagattcaggtgaaagtcctgaactgtgacactatcagccaggtgaaggag
aagatcctggatgccatctacaagaacgttccttattctcatcgtcaaaaagccgcagac
atggatctagagtggcgtcagggcagaggggttcggatcatcctgcaagacgaggacatg
accacgaagatcgagagcgactggaagaggctcaacatgctgttgcattaccaggtatct
gataatgcgctggtggccctcgtcccaaagcaggtcactgcctacaactctgtaaacaac
tccaccgtctccaggacgtctgcgagcaaatacgaaaacatgatcaaatacacaggtagc
ccagacagcctgcgctctcgtacacccatgatcacacccgacctggaaagtggagtcaag
gtttggcacctggtgaagaaccacgagcacggagaccagaaagagggcgaccgcggcagc
aagatggtctccgagatttatctgaccagactgctggctaccaagggcacgctgcagaag
tttgtagacgacctcttcgagaccatcttcagcacggcgcaccgaggaagcgccctcccg
ctcgccattaaatacatgttcgactttttggacgagcaagccgacaagcatggcatccac
gaccctcacgtccggcacacgtggaagagcaactgcctacctctgaggttttgggtgaac
gtgattaaaaatccccagtttgtgttcgacatccataagagcagcatcacggatgcctgc
ttgtctgttgtggctcagaccttcatggactcctgctccacatctgagcaccgcctgggg
aaagactcaccctccaacaagctgctgtatgccaaggacatccccagctacaagagctgg
gtggaaagatactactctgacatcaataagatgcccgcgatcagcgaccaggacatgaac
gcttacctggccgagcagtcccgtatgcacatgaacgagttcaacaccatgagctccctc
agcgagatctattcatacgtggggaaatatgcagaggagattgtgtgcgcgttggaggag
gacgacggtgccaggaaacagagactggccttcaaactggagcaggtggtcgcctttatg
agcctggagagctga
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integrated database retrieval system