Silurus meridionalis (southern catfish): 124401379
Help
Entry
124401379 CDS
T08004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124401379
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124401379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
U-box
zf-RING_5
DUF6591
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
124401379
NCBI-ProteinID:
XP_046729620
LinkDB
All DBs
Position
18:complement(25287312..25294220)
Genome browser
AA seq
557 aa
AA seq
DB search
MAEASISVTQDQFSCPVCLDLLKDPVTTPCGHSFCKVCINDCWDQENQKGVYSCPQCRHT
FTPRPVLHRNNMLAEVVEKLKKTEVRAASPAHCYAGPGDVECDFCSGRKHKAVKSCLMCL
ASFCETHLKPHYEVPGLKKHTLIKASGNLQEKICSEHDEVLKIYCRTDQSFICYLCTKHE
HRGHDTVAAAAERSEKQTELKEEQIKFQQRIQEKQKKMQELKQAVNIIKLSAQTAVDDSE
KIFTEMISFMEKKRSEVTELIRDQEKAELSGAERLLEQLEQEISDLQRRIIELEQLSHTH
DHIHFLQRFQSLSVSSGCEDSPSITVHQHLTFDRVRKSVSDLKKRFEELCQEKFIIIHEH
AAAVQMILPSEPQSREDFLYYFCDLTLDPNTVYYYLILSEKNKVVTLSNTNQLYSDHPER
FDSYWQVLSKESVCGRCYWEVEWSSDGYVYISVSYKDIRRKGRGYECCFGGNNQSWSLQC
SSSSVYFYHNKVKTDLKVSSSSRIGVYVDHSAGTLSFYSVSDTMKLLHRLHTTFTQPLYA
GFWLPFYGTTVRLCDQQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtaactcaggatcagttcagctgtccagtgtgtctggat
ctcctgaaggatccagtgactaccccgtgtggtcacagtttctgtaaggtgtgtattaat
gactgctgggatcaggagaatcagaagggggtctacagctgtcctcagtgcagacacacg
ttcactccaaggcctgttctacacagaaacaacatgctggctgaagtggtggagaaactg
aagaagactgaagtccgagctgcttctcctgctcactgttacgctggacctggagatgtg
gaatgtgatttctgtagcgggaggaaacacaaagccgtcaagtcgtgtctgatgtgtctg
gcgtccttttgtgaaactcatctgaaacctcattatgaagttcctggtctgaaaaaacac
actttaatcaaagcctctggaaatctacaagagaagatctgctctgagcatgatgaagtg
ttgaagatctactgtcgtaccgaccaaagcttcatctgttatctgtgtacgaagcatgaa
cacagaggacatgacacagttgcagctgcagcagaacgatctgaaaaacagactgagctg
aaggaggagcagattaaattccagcagagaatccaggagaagcagaagaagatgcaggag
ctgaaacaggctgtgaacattataaagctcagtgcacagacagcagtagatgacagtgag
aagatctttactgagatgatcagcttcatggagaaaaagcgctcggaggtgacagagctg
atcagagatcaggagaaggctgaactgagtggagctgaacgactcctggagcaactggag
caggagatttctgatcttcagaggagaatcattgagctggagcagctttcacacacacac
gatcacatccatttcctccagagattccagtctctcagtgtatcttctggatgtgaggac
tcacccagcatcactgtccatcaacatctcacatttgatagagtgaggaaatcagtctct
gatctgaaaaagagatttgaggaactctgccaggagaaattcatcataattcatgaacat
gctgcagcagttcagatgattttaccctcagaaccacagagcagagaagattttctgtac
tatttctgtgatctgactctggatcccaacacagtatattattacctcattctgtctgag
aagaacaaagtggtgacactcagtaacacaaaccagctgtactctgatcatccagagaga
tttgactcctactggcaggtgttgagtaaagagagtgtgtgtggacgctgttactgggag
gtggagtggagcagtgatggttatgtgtacatatcagtctcatataaagacatcagaagg
aaaggacggggttatgagtgttgttttggaggcaacaatcagtcctggagtctgcagtgt
tcttcttcttctgtttatttctatcacaacaaagttaagactgatctgaaagtttcatca
tcctccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctgatacgatgaagctcctccacagactccacaccacattcactcagcctctatacgct
ggattctggctgcctttttatggaacaactgtgagattatgtgatcaacaatga
DBGET
integrated database retrieval system
