Silurus meridionalis (southern catfish): 124401381
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Entry
124401381 CDS
T08004
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124401381
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124401381
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
zf-RING_10
zf-Nse
DUF4407
zf-UDP
Motif
Other DBs
NCBI-GeneID:
124401381
NCBI-ProteinID:
XP_046729625
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Position
18:24978714..24990029
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AA seq
582 aa
AA seq
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MAEASISVDQDQFSCPVCLDLLKDPVTIPCGHSFCKVCINDCWDQEDQKGVYSCPQCRHT
FTSRPVLHRNNMLAEVVEKLKKTEVRAASPAHCYAGPGDVECDFCSGRKHKAVKSCLMCL
ASFCETHLKPHYEVPSWKKHKLIEASGNLQEKICSEHDKVLEIYCRTDQSFICYLCVTDE
HRSHDTVSVKAYRTEQQTELKEEQMKFQQRIQEKQKKVQELKQDVNIIKLSAQTAVDDSE
KIFTEMISSMEKKRSEVTELIRDQEKAELSRAERLLEQLEQEISDLQRRITELEQLSHTH
DHIHFLQEIKVHYIHISRRNMKVLASRHQSPKTDRPNVPADVCEDSLSINVNISFDAVRK
SLSDLKKRLEEFCQEELIKIREHAENIQILLSEPTSRNEFLKYFCDLTLDPNTVNYYLIL
SEKNKVVTRSETKQPYSDHPERFKYFSQVLSKESVCGRCYWEVEWSSDGNVLISVSYKDI
RRKGRGDECWFGHNNQSWSLECSSSSVNFWHNNVKTDLKVPSSSRIGVYVDHSAGTLSFY
SVSDTMKLLHRLHTTFTQPLYAGFRFFFSKPGSSMRLCSPKE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatcaggatcagttcagctgtccagtgtgtctggat
ctcctgaaggatccagtgactatcccgtgtggtcacagtttctgtaaggtgtgtattaat
gactgctgggatcaggaggatcagaagggggtctacagctgtcctcagtgcagacacacg
ttcacttcaaggcctgttctacacagaaacaacatgctggctgaagtggtggagaaactg
aagaagactgaagtccgagctgcttctcctgctcactgttacgctggacctggagatgtg
gaatgtgatttctgtagcgggaggaaacacaaagccgtcaagtcgtgtctgatgtgtctg
gcctccttttgtgaaactcatctgaaacctcattatgaagttccttcctggaagaagcac
aagttaatcgaagcgtctggaaatctacaagagaagatctgctctgagcatgataaagtc
ctggagatctactgtcgtaccgaccaaagcttcatctgttatctgtgtgtgacggatgaa
cacagaagccacgacaccgtctcagttaaagcctacagaactgaacaacagactgagctg
aaggaggagcagatgaaattccagcagagaatccaggagaagcagaagaaggtgcaggag
ctgaaacaggatgtgaacattataaagctcagtgcacagacagcagtagatgacagtgag
aagatctttactgagatgatcagctccatggagaaaaagcgctcggaggtgacggagctg
atcagagatcaggagaaggctgaactgagtcgagctgaacgactcctggagcaactggag
caggagatttctgatcttcagaggagaatcactgagctggagcagctttcacacacacac
gatcacatccatttcctccaggaaataaaggtacattacatccacatttccaggaggaat
atgaaggttttagcctccagacatcagagtcccaaaaccgacagaccaaatgttccagct
gatgtgtgtgaagattcactcagcatcaatgtcaatatctcatttgatgcagtgaggaaa
tctctctctgacctgaaaaagagacttgaggaattctgccaggaggaattgatcaaaatc
cgtgaacatgctgagaacattcagattttactctcagaaccaacaagcaggaacgagttt
ctgaaatatttctgtgatctgactctggatcccaacacagtaaattattacctcattctg
tctgagaagaacaaagtggtgacacgcagtgagacaaagcagccgtactctgatcatcca
gagagatttaaatacttcagccaggtgttgagtaaagagagtgtgtgtggacgctgttac
tgggaggtggagtggagcagtgatggtaatgtgttaatatcagtctcatataaagatatc
agaaggaaaggacggggtgatgagtgttggtttggacacaacaatcagtcctggagtctg
gaatgttcttcttcttctgttaatttctggcacaacaacgttaaaactgatctcaaagtt
ccatcatcctccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctac
agcgtctctgatacgatgaagctcctccacagactccacaccacattcactcagcctcta
tatgctggattcaggtttttcttttcgaaaccaggatcatctatgaggttgtgcagtcca
aaagaataa
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