Silurus meridionalis (southern catfish): 124401417
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Entry
124401417 CDS
T08004
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124401417
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124401417
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRP1_N
U-box
zf-RING_5
Spc29
zf-RING_6
SpoIIE
DUF6591
Motif
Other DBs
NCBI-GeneID:
124401417
NCBI-ProteinID:
XP_046729676
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All DBs
Position
18:26413910..26416651
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AA seq
465 aa
AA seq
DB search
MAEASISVDQLSEDQFICPVCLDLLKDPVTVPCGHSFCKVCINGCWDQEDQKGLYSCPQC
RDTFTPRPVLRRNNMLAEVVEKLKKKTEVQAASPDHCYAGPGDVECDFCTGRKHKAIKLC
LVCVASYCEIHLKPHLEVPALKKHTLTEASAKLQEKICSEHNKLIEIFCRTDQTCICYMC
MMDKHKGHDTVTASGERTEKQSELKKQQMKSQQRIQEKQKKVQELKQAVNTIKLNAQTAV
EDSEKIFTKMISFMEKRRSEVKEMIRAQEEAELSRPERLLEELEQEITDLQRRVTELEQL
SHTHDHIHFLQSFQSLCVSAGHQPPLIKRPDFHMSSITVHQHHFSDGMRKYFSDLKKKLE
EFCEEEFNKIPAQVTFSFAEPQRRDKFLKCTSHTHTHTHTHTHTHKQCSACFYSILDFCY
LTLDPNTAHRKLILSEKNRAVSYSGRKQQYSDHPERFDSWKERTG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatcagctttcagaagatcagttcatctgtccagtg
tgtctggatctcctgaaggatccggtgactgtcccgtgtggtcacagtttctgtaaggtg
tgtattaatggctgctgggatcaggaggatcaaaagggcctctacagctgtcctcagtgc
agagacactttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtg
gagaaactgaagaagaagactgaagtccaagctgcttctcctgatcactgttatgccgga
cctggagatgtggagtgtgatttctgcaccgggagaaaacacaaagccataaagttgtgt
ttggtgtgtgtggcttcctactgtgaaattcatctgaaaccacatctagaagttcctgct
ttgaaaaaacacacattaactgaagcgtctgcaaaactacaagagaagatctgctctgaa
cataacaagctgattgagatcttctgcagaactgatcaaacctgcatctgttatatgtgt
atgatggataaacataaaggacacgacactgtcacagcctcaggagaacgaactgagaaa
cagagtgagttaaagaagcagcagatgaaatcccagcagagaatccaggagaagcagaag
aaggtgcaggaactgaaacaggctgtgaacactataaagctcaatgcacagacagcagtg
gaggacagtgagaagatctttactaagatgatcagcttcatggagaaaaggcgttcggag
gtgaaggagatgatcagagctcaggaggaggctgaactgagtcgacctgaacgactcctg
gaggaactggagcaggagatcactgatcttcagaggagagtcactgagctggagcagctt
tcacacacacacgatcacatccatttcctccagagtttccagtctctctgtgtctctgct
ggacatcaacctcctctaataaaaagaccagattttcacatgtccagcatcactgtccat
caacatcacttctcagatggaatgaggaaatatttctcagatctgaagaagaaacttgag
gaattctgtgaggaggaattcaacaaaattcctgcacaagttacattttctttcgcagag
ccacagagaagagataagtttttgaaatgtacgtcacacacacacacacacacacacaca
cacacacacacacacaaacagtgttcagcttgtttttactctattttagatttctgttat
ctgactctggatcccaacacggcacatcgtaaactcattctgtctgagaagaacagagca
gtgagttacagtggaagaaagcagcagtactctgatcatccagagagatttgactcctgg
aaggaaaggacggggtga
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