Silurus meridionalis (southern catfish): 124401872
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Entry
124401872 CDS
T08004
Symbol
tfec
Name
(RefSeq) transcription factor EC isoform X1
KO
K15591
transcription factor EC
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124401872 (tfec)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
124401872 (tfec)
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GFIT
Motif
Pfam:
DUF3371
HLH
MITF_TFEB_C_3_N
Motif
Other DBs
NCBI-GeneID:
124401872
NCBI-ProteinID:
XP_046730356
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All DBs
Position
18:9515898..9551275
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AA seq
450 aa
AA seq
DB search
MFQSQSSVPVSLMRSGINEQWDSSPWYSSYSYPSTSQQGEGQHSSWSLSYFNGKVQNHLE
NSKYHLPQSQAQQVKQYLTLGTKLAGQAPQHPGQALGTMPVMRNGHMTPVSDSSTPGSPV
TLFTLANSHDAEFAVNEVIDDLIGFESAFNEGSLECMEPSIIMQNNVAMNSGILDAYGGD
QGMTASHGGLTPLSCPTKLTVKMEVTEHDTRVLAKERQKKDNHNLIERRRRYNINYRIKE
LGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQHARELESRQKKLEQTNRRLVLRIQ
ELEIQARAHGLPSNLGAAEISSHLIKRQALPVPPAITPGPQTSLYQQDELNSTEYMQRNS
LSVLHAGNEGNSSSSGDHADTTSTTFSDPLSHFTDFFSATLKEEQRLDELLMEEALSPFG
TDPLLSATSPNASKGSSRRSSFSTDDNDDL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttccagagtcaatccagtgtccctgtttctctcatgaggagtggcataaatgaacag
tgggattctagcccatggtattcatcctatagctacccctccacctctcagcaaggcgag
ggccaacattcatcctggagcctgtcctatttcaacgggaaggttcagaaccacctggag
aactccaagtaccaccttccccaatcccaggcacagcaggtcaaacagtacctgacctta
ggcaccaagcttgccggccaggccccccaacacccaggccaggccctgggcacaatgcct
gtcatgcgcaacggccatatgacacctgtcagtgacagcagcacacctggcagcccggtc
accctgttcacccttgccaacagtcatgatgctgaatttgcagtgaacgaagttattgat
gatctgattggctttgaatctgctttcaatgaagggagcttggagtgtatggagcctagc
attataatgcaaaataatgtggccatgaacagcggcatcctggatgcctatggcggtgac
caaggtatgactgcctctcatggtggactgacacccctctcttgccccacaaagctcact
gttaaaatggaagtcacagaacatgacaccagagtcttagcaaaagagagacagaagaaa
gacaatcacaatctcattgaaagaaggcgacgatacaacatcaactacagaatcaaagaa
cttggaactctgatacccaagtcgaatgatcctgatatgcgctggaacaaagggaccatc
ctcaaggcctcagtggagtacattaagtggctacaaaaagagcagcaacatgcacgagag
ctggagagccgccagaaaaagctggagcagactaacaggagattggtgctcaggattcag
gagttagagatccaagctcgtgcccatggtctgcccagcaatctgggagcagcagagatt
tcatctcacctcatcaaaaggcaggcacttccagtacctcctgccattactcctggacca
caaacgtctctttaccaacaggatgagcttaacagcaccgagtacatgcagagaaactcc
ttgtctgtgctccatgctggaaatgaaggcaacagtagctcttctggtgatcacgcagac
accacgtcgacgacattctcggacccgctgtcacacttcacggacttctttagtgctact
ctgaaggaggagcagaggctggatgagcttctcatggaagaagctctgtctccgttcgga
accgaccctctgctttcagccacttcgcccaatgcttctaagggaagcagccgcaggagc
agctttagcacagatgacaacgatgacctttga
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