Silurus meridionalis (southern catfish): 124402196
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Entry
124402196 CDS
T08004
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402196 (tmf1)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124402196 (tmf1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Tup_N
ATG16
Motif
Other DBs
NCBI-GeneID:
124402196
NCBI-ProteinID:
XP_046730982
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All DBs
Position
19:complement(16452774..16463309)
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AA seq
1123 aa
AA seq
DB search
MSWFNASQLSSFAKQALSSAQKSIDRVLDIQEEDQWGDAITPVIDDVQSQPSPTGWGMNQ
WDSPSEECPKVATPTSEAITKPVTRTMVEETESFFSAFLSPGDGQPVQTTPVVSVAPTKS
YRRPQEKSEKEARPAAEDDVDSSTLSQEDLSKQGSGQVPEIQLEDMTPKEEASVLEQTEP
AKEIESKPETQDSNLSPQVAQAETETPAEPESKVESAGSADPKSPGREPPKDVMLESKDA
KAEDRQSDTPSPPVSAFSSGTSTTSDIEVLDHESVLSESSASSRQETAEGKAGLHLMQGS
FQLLSASTCSDFPRLDDYPKLTESCGSSSDAFERIDSFSVHSLDSRSVSEVNSDDEVPGS
RTLASVTAGTSLPPAVSATQTNQEQEEAEPGTTDCLKDQSVDEMEESGRSATPVNSEQPE
ELLEEEHESEEHESGSHLTLINERTEPEESHDTVESPITEEQKGASTCQLLELQKTVNDL
IGRLEKREAQLLAVSKDKARLEEDCDNLKDEMISLREETASVQSLKDEFTQRIADAERKA
QLACKERDIAKKEIKGLREELSTRFNSSETLELIREKEEQIRGLLEEGEKLSKQQLQHSN
IIKKLRAKEKESETKIAKQSKKLKEEEDELKQLQQVLDAKEELEKQHRESIKKLNSAVER
QEKELSSLQTENDELQEKNRSLEAAVDAAYKELAEMHKCNATKASEAQELALSREVQAKE
ELSLALDKAQEEARLQQEALANQVADLRLALQRAEQQQARKEDYLREEISELQQRLQGAE
TRNQELSQSVTSATRPLLRQIENLQSNLGSQTASWDKLEKNISDRLADAQAQLAVAVEKE
RSATEELHAIKAQLASLDSQNSSLRQEKGRLQGQLDVERTRRETLENDSSRERVELENLK
GEYTRALEDAKKEKLLLTNQLEMEKVKVEQEKKKCYLAQEALKEKERKGLSVSLSEPPAS
STPSLSRSSSISGVDHSGIHTSLLSHEDSPDHSFASVTLSGSSLYEAARLSGGSNIIENL
HSQLKLREGEIAQLQVEISNLERTRSAMAEELVRLTNQNDELEAQVKEIPRFRVQLKDLE
QRHNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKNQK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttaacgcttcccagctgtccagcttcgccaaacaggctctgagctcggcg
cagaaatccatcgaccgagtcctggatatacaggaggaggatcagtggggcgacgccata
acgcccgttattgacgatgtacagagccagccgtcgcccacggggtgggggatgaatcag
tgggactctccttcagaagaatgcccaaaggtggccacgcctacatccgaggccatcacc
aaacctgtcacccgcaccatggtcgaagaaaccgagagtttcttcagtgccttcttgtct
cctggagacggccagccggttcagacgactccagtggtgtccgtggcgccgactaaatcc
tatcgccggccgcaggagaaatcggaaaaagaagcgcgacctgctgccgaggatgacgta
gactcttccacgctttctcaggaagatttgagcaaacaaggcagtggacaagtaccagag
attcagctagaggacatgacgccaaaggaagaagcgtccgttctggagcaaactgaacca
gcaaaggagattgagagcaagccagaaacgcaggattccaacttaagtccgcaagtcgca
caagctgaaacggaaacgcctgcggaacccgagtcgaaagtcgagagcgctggttctgcc
gaccctaaaagccccgggagagagcctcccaaagacgtgatgttggaatccaaagatgcg
aaagcagaagataggcaaagcgacacgccgtctccacctgttagcgccttctcatccggt
acctccaccaccagtgacatcgaagtgctggaccacgagagcgtcctcagcgagagctca
gccagctccaggcaggagactgccgaaggtaaagcagggttgcacctcatgcagggctct
ttccagctcctctccgcttcaacctgcagcgatttcccacgtctggacgactacccgaag
ctgacggagagctgcggctcctcgtctgatgctttcgagcgcatcgactcattcagcgtg
cactctctggacagccgcagtgtaagcgaagtcaactcggacgacgaggtccccggaagc
cgcactctggcatccgttaccgccgggacgagcctgcccccagctgtatctgcaacgcag
accaatcaggagcaggaagaggcagagcctggaacgactgactgtctaaaggaccaatcg
gtggatgagatggaggagagcgggagaagcgcaactccggtgaactctgaacagccggaa
gagctgctggaggaggagcacgagtctgaggagcacgagtctgggtcacatctcactttg
attaatgaaagaactgaacctgaagagtcacatgacacagtagaatcacccataaccgag
gagcagaaaggagcctccacctgccagcttctagagcttcagaagacagttaatgatctt
ataggaagactggaaaaacgagaagcccagctgttagctgtgagcaaagacaaagctcgg
ctggaagaggactgtgataaccttaaagatgagatgatcagtctgagggaggagaccgcc
agcgtgcagtctctgaaagacgagtttacgcagcgtatcgctgatgcagagaggaaagcc
cagctcgcctgcaaggagcgtgacattgccaagaaggaaatcaaggggcttagagaagag
ctttcgaccaggttcaactccagcgaaaccctggaactgatcagagaaaaagaggaacag
atcagaggccttctagaagagggcgagaagctgtccaagcagcagctgcagcactccaac
atcatcaagaagctgagggcaaaggagaaggagagcgaaacgaagatcgccaagcagtcc
aagaaactcaaagaggaagaggacgaactgaaacagctgcagcaggttctagacgcgaag
gaggagctggagaagcagcaccgagagagcattaagaagctgaactctgccgtggagcgt
caggagaaggaactgagcagcctgcagactgaaaacgatgagttgcaggagaagaaccga
agcctggaggccgctgttgatgccgcttacaaagagcttgctgaaatgcacaagtgtaac
gctacgaaggccagcgaggcacaggagctagctctcagccgtgaagtccaggccaaggag
gagctcagcctggcattggacaaagcccaggaagaggcccgccttcaacaggaggcattg
gccaatcaggtggcagatttgaggctggccctgcagagagctgagcagcagcaggccagg
aaggaggattacctgcgagaggagatcagcgagcttcagcagaggttgcagggagcagag
accagaaaccaggaacttagtcagagcgttacctcggcgacgaggcccctcctcaggcag
atcgagaatctgcagtctaatctgggatctcagacggcatcctgggacaaactggagaag
aacatctcggaccgtttagccgatgctcaggcccagcttgctgttgcggtagagaaggag
cgctctgcgacagaggaactccacgctatcaaggctcagctggcttctctggattcccag
aattcctcactgcggcaggagaagggaagactgcagggtcagttggacgtggagaggact
cggcgcgagacgctggagaacgacagcagcagggaacgtgttgaactagagaacctgaaa
ggcgagtacactcgagctctggaagatgccaaaaaggagaagttgcttctgacaaaccag
cttgagatggagaaagtgaaggtggagcaggagaagaagaaatgctacctcgcacaagag
gccttgaaggaaaaggagcgtaagggtctgagtgtgtcgctgagcgagcctcctgcatcc
tctactccatctctgtctcgctccagttccattagcggggtggatcacagcggcatacac
acctctctgctctcccacgaggactctcctgatcactcgttcgcctccgtgaccctcagc
gggagcagcctgtacgaagcagcgcgtctcagcggaggctccaacatcatcgagaacctg
cactcgcagctcaaactgcgtgagggagaaatcgcacagctccaggtggagatctcaaat
ctggaaaggactcgctcggcgatggcagaagaactggtgcggctcactaatcagaatgac
gagctggaggcccaagtgaaggagatccccagattcagagtgcagctcaaggacctggag
cagaggcacaacaccattctgcagatgtacggagagaaagcagaagaggccgaggagctg
cggctcgacctggaagatgtcaagaacatgtacaagacccaaatagacgagctgctcaag
aaccagaaatag
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