Silurus meridionalis (southern catfish): 124402447
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Entry
124402447 CDS
T08004
Symbol
bap1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124402447 (bap1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124402447 (bap1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124402447 (bap1)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124402447 (bap1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124402447 (bap1)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
124402447 (bap1)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
124402447 (bap1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124402447 (bap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
124402447
NCBI-ProteinID:
XP_046731457
LinkDB
All DBs
Position
19:complement(17773072..17780120)
Genome browser
AA seq
732 aa
AA seq
DB search
MSKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGAVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSRVELGSTLSRIKVFTK
GFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVK
YESRLEVLKRNRQIVLEGLQQAIRATQTDAVQERKPQDSSSESTPPTVKKEERSDTPIAP
APTPPTADGSALAVSSSSEKHKTTVKPPAPPPGGNTSGPIVQRLPAFLDNHNYAKSPMQE
EEDLAAGVARARAPGPPQPSYSDDEDDYEDEEEDRFRKKPSVRGRGVTRSGTGGGVSGVE
SQLALSMLAERLKKETQKKEASSVTPAPGSSALNVRTEGRTGGISITPACQPSPTPSNES
TDTASEIGSAFNSPLRSPARSQAATRPSSPVACHLSRVLFGEDDVLLRLDTRHNRAVREL
GALISSTQLQLRDDGTIFTLLSTGTAHTHTPSEVKWRKEAQGRHGCRERGASRELKQEKE
ISESSNDKTSVETPSFAEPEALTKPLGEKYTPKELLALLKCVEADIANYEVYLKEEVEKR
KKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIGRLHKQRKPDR
RKRSRPYKAKRQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggctggctggagctggagagcgaccccggtctcttcacgctgctggtggag
gatttcggtgtgaagggcgtccaggtggaggagatctatgacctgcagagtaaatgccag
ggcgctgtttatggcttcatcttcctgtttaaatggattgaggagcgtcgctccaggagg
aaagtttccactctggtggacgagacatcggttattgatgacgacatcgtcaacgacatg
ttcttcgctcaccagctgattccaaactcgtgtgcgactcatgccttactgagcgtgctc
ctgaactgcagtagggtggagctaggcagcacactgagccgcataaaggtctttaccaag
gggttcagtccagagagtaaaggctatgccatcgggaatgctccagagttagccaaggca
cacaacagtcatgccaggcctgaaccacggcacctgcccgagaagcagaacggcatcagc
gccgtgaggacgatggaggccttccactttgtcagctacgttcccatcaaagaccgactg
ttcgagctggacggcctgaaagcctaccccatcgaccacggtccgtggggggaggaggag
gagtggacagacaaggctcggagggtcattatggagaggatcggcctggcaaccgcaggt
gagccgtaccacgacatccgcttcaacctgatggctgtggttcctgaccgcagggtgaag
tatgagtccaggctcgaggtcctaaaacgcaaccggcagatcgttctggaaggactgcag
caggcgatcagagctacccagacagacgcggtgcaggaacgcaagccgcaagactcctcc
tctgagtccacgccccccactgtaaaaaaggaggagcgttcagacactccgatagctcct
gccccgactccgcccacagcagacgggagtgctcttgctgtgtccagctcctcagaaaaa
cacaaaaccacagtaaagccccctgctccgcctccagggggcaacaccagcggccccatc
gtccagcgcctgcctgctttcctggacaaccacaattatgccaagtcccccatgcaggag
gaggaggacctggctgcaggtgtggcccgtgctcgtgcccccggaccccctcagccctcg
tattctgatgatgaggatgactatgaggatgaagaggaggacaggttccgcaaaaagcca
agcgtgcgtggacggggcgtgacccggagcggcactgggggtggtgtctcaggcgtggag
agccagctggctctgagcatgctcgctgagagacttaaaaaggagacacagaagaaggag
gcgtcgtccgtgacgcccgcacccggctcctcggccctgaacgtgcgcaccgagggccgc
accgggggcatcagcatcacgcccgcctgccagccctcgcctacgcccagcaatgagagc
acggacacggcctccgagattggcagtgctttcaactcgcctctgagatctccggcacgc
tcgcaggctgccactcgaccctccagccccgtggcctgccacctgagccgcgtgctgttc
ggagaagatgacgtcctgctaagactggacactcgacacaatcgcgccgtccgagaactc
ggagcgctgatcagctccacgcagctgcagcttagagacgacgggaccatctttacactt
ctgagtactggtacagcacacacacacaccccttctgaggtgaagtggagaaaggaggct
caggggagacatggatgcagggaaaggggagcatctcgtgagctaaaacaggaaaaggag
atctcggagtcgagcaacgacaagactagcgttgagacgccgagcttcgccgagcccgag
gcgctcaccaaaccactcggggagaaatacacgcctaaagagctgttggctctgctgaag
tgtgtggaggccgatatcgccaactacgaggtatatctaaaagaggaggtggagaaacgc
aagaaatacaagatcgatgaccagagaaggacccacaactatgatgagttcatctgcacc
ttcatttccatgctggcacaagaagggatgctggcgagcctggtggaacagaacatttcg
gtgcgcaggcgtcagggcgtcagcatcggccgcctccataaacagcgcaagccggaccgg
aggaagcgatcgcggccgtacaaagccaagcggcagtga
DBGET
integrated database retrieval system
