Shewanella mesophila: K0I73_11510
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Entry
K0I73_11510 CDS
T09171
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_11510
DNA repair and recombination proteins [BR:
smes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
K0I73_11510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA
AAA_16
AAA_22
zf-ribbon_3
SLFN-g3_helicase
zf-tcix
zf-Di19
DZR
MgtE_N
zinc_ribbon_2
Cys_rich_CPXG
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QYJ84886
LinkDB
All DBs
Position
2628168..2629907
Genome browser
AA seq
579 aa
AA seq
DB search
MQLRDYQQQAVDAAVRHFKASQDSAVLVLPTGAGKSIVIAELARIARGRILVLTHVKELV
AQNAEKVGLLTDAASIYSAGLKQKSTANKTVVASIQSAVKSPSQFKEPYSLVIIDECHRV
SADKESQYQKLLNHLQKQNPKLKLLGLTATPYRLDSGWIYRYHYHGKMGNSQHPAFEQCI
FELPMRPLIKQGFLTSPKLFDGLSAQYDFSTLQASTTGEYREQEVNALLNIAGRATQAIV
EQIIALSKHKQGTIIFAATVRHAQEIMALLSDEQAGLITASTPSDERDEIIDTFKRRQLK
YLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRICEGKTDCLVIDYAANGFD
LFFPEVGHAKPDSKSVPVQVHCPVCHFANIFWGLVDDDGDLIEHFGRRCQAVLETKDGKQ
QCDFRFRSKSCPYCGEENDIAAKICQHCDQVLVDPDKRLKEVLQQKHHHLFRCQEMLLEH
HQDKLRVRYIDIEGNDFSCYFNFQTPAQIKAFYAIFVHQHTRTPGCKHPKLNSVEQVIAA
KDAFRHPDLLLLKKGKKGWELLERFFDYQGRFHTENKFV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgcaactacgagattaccaacaacaagccgttgacgccgcggtgcgtcattttaaagca
agccaagactctgcggtgttagtacttcctaccggcgcaggtaaaagtattgttatcgcg
gaattagcccgtatcgcccgtggccgcatcttagtgctgacccatgttaaagagttagtg
gcgcaaaacgctgaaaaagtcggtctactaactgatgcggccagtatctactctgctggg
ctaaaacaaaaatcgacggcgaataaaacggttgttgccagtattcaatcagcggttaag
agtccatcgcaatttaaagagccctactctttagtgattattgatgagtgtcaccgtgtt
agtgcagataaagagagccaatatcagaaattgcttaaccatctgcaaaagcaaaacccc
aaacttaaattattaggcctaacagcaaccccctatcgactcgattcaggttggatttat
cgttaccactatcacggtaaaatgggaaacagccaacatccagcatttgagcagtgcatt
tttgagttgccaatgaggccgctaataaaacagggattcttaacctcaccaaaactgttt
gatggcctgtccgcacaatatgatttcagtactcttcaagcctcgacgactggtgagtac
cgagagcaagaggtcaatgccttgctcaatattgcaggtcgagcgactcaagctatcgtt
gagcagatcattgcactatcgaagcacaaacagggcaccattatttttgccgcaacggta
agacatgcacaagagatcatggcccttctcagtgatgagcaagcgggacttatcacagcc
tcaacgccgtcagatgaacgtgatgagatcattgatacctttaagcggcggcagcttaaa
tacttggtcaatgttgcagtgctaaccactggcttcgacgccccccatgtagaccttatc
gccatcttaagacccactgcatcggttagcctatttcagcagatggtaggtcgtggcctg
cggatctgcgagggaaagacagattgtctggtgattgattatgccgccaacggttttgac
ctgtttttccctgaagttggccacgcaaaacccgatagcaagagtgttccggttcaagtc
cactgcccggtctgtcacttcgccaatattttttggggactggtcgatgatgatggagat
ttaatcgagcactttggacgccgatgccaagctgtgctcgaaaccaaagatggtaagcaa
caatgtgattttcgctttcgctctaaatcctgcccttattgtggtgaagaaaacgatatt
gcagcaaagatatgtcagcactgcgatcaggtgttagttgatccagataaacgccttaaa
gaggtactacagcaaaaacatcatcacctatttcgttgccaagagatgctgttagagcac
catcaggataagctacgagtccgctatatcgatattgagggaaacgactttagttgttat
ttcaattttcagactccggcacaaataaaggccttctacgcgatatttgttcatcaacac
actcgaacaccaggctgtaaacaccccaaattaaatagtgtcgaacaggttatcgccgca
aaagatgccttcagacacccagatctattactgcttaagaaaggtaaaaaagggtgggaa
ttgttagagcgatttttcgactatcagggtcgatttcacaccgagaataagtttgtctaa
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