Sinorhizobium meliloti Rm41: BN406_04230
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Entry
BN406_04230 CDS
T02332
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN406_04230 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smi03000
]
BN406_04230 (nifA)
Transcription factors [BR:
smi03000
]
Prokaryotic type
Helix-turn-helix
Other families
BN406_04230 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA_2
AAA
AAA_3
nSTAND3
AAA_22
AAA_7
TsaE
Motif
Other DBs
NCBI-ProteinID:
CCM70512
LinkDB
All DBs
Position
pSYMA:complement(723597..725222)
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AA seq
541 aa
AA seq
DB search
MRKQDKRSAEIYSISKALMAPTRLETTLNNFVNTLSLILRMRRGGLEIPASEGEKKITAA
TRNSGSPSAADYTVPKAAIDQVMTAGRLVVPDVCNSELFKDEIKWRGIGPTAFIAAAVEV
DHETGGMLWFECAEESDSDYEEEVHFLSMAANLAGRAIRLHRTMSRRERTFAEEQQEQQN
SRDEQSQSSARQRLLKNDGIIGESTALMTAVDTAKVMAETNSIVLLRGETGTGKECFAKL
IHQHSTRQKKPFIKFNCPALSESLLESELFGHEKGAFTGAIAQRVGRFESANGGTLLLDE
IGEIPPAFQAKLLRVIQEGEFERVGGTKTLKVDVRLIFATNKDLEMAVQNGEFREDLYYR
ISGVPLILPPLRHRDGDIPLLARAFLQRFNEENGRDLHFAPSALDHLSKCKFPGNVRELE
NCVRRTATLARSKTITSSDFACQTDQCFSSRLWKGVHCSHGHIEIDAPAGTTPLLGAPAN
DVPPKEPGSAGVASNLIERDRLISALEEAGWNQAKAARILEKTPRQVGYALRRHGVDVRK
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacaggacaagcggtccgccgaaatttacagcatatcaaaggctctgatggcc
cccactcgtcttgagaccacgcttaacaatttcgtgaataccctctctttgattctgcgc
atgcgccgcggcggactcgagattccggcgtcggaaggagagaaaaagataacagcggct
acccgcaacagcgggtctccttctgccgctgattatactgtaccaaaggccgcaatagac
caagtcatgactgccgggcggctggtcgtaccagacgtttgcaactctgagctgttcaag
gatgagataaaatggcgcggaattggtccgactgccttcatcgctgcggcggtggaggtc
gatcacgaaacgggcggaatgctgtggttcgagtgcgccgaagagtccgattctgattat
gaggaggaggtacactttctttctatggccgccaatcttgcggggagggccattcggctt
catcgcacaatgagcaggcgtgagcggacatttgccgaagagcagcaagaacaacagaat
tcacgtgatgagcagagccagagttccgcccgccagcggctgctcaagaatgacgggatc
atcggggaaagtaccgccctcatgacggcggtagataccgccaaagtcatggcagagacc
aattcaatcgttctccttaggggagaaacaggaactggcaaggaatgctttgcgaagcta
atccaccagcattcgactcggcaaaaaaagcccttcatcaagttcaattgccccgcgctg
tctgagagccttctcgaatcagagctgtttggacatgagaaaggtgcgttcaccggggct
attgctcaacgagtaggccgtttcgaatcggcgaatggcggaacgttgctgctcgatgaa
atcggcgagattcccccggcgttccaagcaaaactgctacgcgtaatacaggaaggtgaa
tttgagcgagtcggcggcacaaagacgctgaaagtcgacgtccggctcatattcgccaca
aataaggatctcgaaatggcggtccagaatggggagttcagggaagacctttactaccgc
atcagcggggtgcccctcattttgccgccccttaggcaccgcgacggtgacattccgctc
cttgcaagagcattccttcagcggttcaacgaagagaacggtcgtgatctccatttcgcg
ccgtctgcgcttgaccacttgtcgaagtgcaagttccctggaaacgttcgcgagctggaa
aactgtgtgcggaggactgcaactctcgccaggtcaaagacgatcacttcgtcagatttc
gcctgccaaacggaccagtgtttttcttctcgcctctggaaaggcgttcactgttcgcat
ggccacattgagatcgatgcgcccgcgggtacaacaccgttgctcggagcgccagccaat
gacgttccgccgaaagagcccggatccgcaggagtggcatccaatctgatcgagcgcgac
cggttgatcagtgcgctggaggaggccggttggaatcaggcaaaggcagctcgcatcctc
gaaaaaacgccccggcaggtcgggtatgctctacgtcggcatggtgtggacgtgagaaag
ctctaa
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