Salvia miltiorrhiza (redroot sage): 130988774
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Entry
130988774 CDS
T09291
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130988774
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130988774
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
130988774
NCBI-ProteinID:
XP_057768714
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Position
6:13243847..13246068
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AA seq
449 aa
AA seq
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MKEIKMNSWLLMVCFGFGFGWMSQVVNGNIGEWDEVWKKRSEESWNRTLETYEPIPEHIV
SHLNVHAKKAVKEIEKVSSDANSTRRELLRGYTGPCMVTNPIDRCWRCQPNWAQRRFRLA
DCVLGFGYKTTGGKNGAFYVVTDPSDSDLISPRPGTLRHAVIQKEALWIIFERSMLIVLQ
QELIMQGDKTIDGRGVRVDIAYGAGITIQFVSNVIIHNIRIHDIVSKSGGMIRDSVDHYG
FRTVSDGDGISIFGSQNIWIDHVSMKNCSDGLIDAIEGSTGISITNSHFTDHDEALLFGA
NDLATYDDKMQVTVAFNHFGKRLVQRLPRCRFGYFHVVNNDYTHWKMYAIGGSSHPTIIS
QGNRFVADHPFAKQVTKREKSPESEWMKWTWVSEGDLFLRGAYFVESGDKDWTKKHPELY
DKIMAAPAKHTAEMTKFAGVLGCTVGEPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaattaagatgaattcatggttgttaatggtgtgttttggttttggttttggt
tggatgtcacaagtcgttaatggtaatattggagaatgggatgaggtgtggaagaagcgc
tccgaggagtcttggaatagaactcttgagacctatgagcccatcccagaacacatagtt
agtcatttgaatgtgcatgccaaaaaggcagtaaaggaaatagaaaaagtaagttcagat
gcaaatagcacaagaagggagctactaagggggtacacgggtccgtgcatggtgacaaac
ccgatcgaccgttgctggagatgccagccgaattgggcgcagaggcggttcaggttggcc
gactgcgtcttagggttcggatacaaaacgaccggcggcaagaacggcgccttctacgtg
gtgacggacccttcggactcggacttgataagccctaggccgggaaccctacggcacgcc
gtgatccagaaggaggcgctgtggatcatcttcgagcgcagtatgctcatcgtcctccag
caggagctcatcatgcagggcgacaagaccatcgacggccgcggcgtccgcgtcgacatc
gcctacggcgccggcatcaccatccagttcgtcagcaacgtcatcatccacaacatccgg
atccacgacatcgtcagcaagagcggcggcatgatcagggactccgtcgaccactacggc
ttccgcaccgtcagcgacggcgacggcatctccatcttcggctcgcagaatatctggatc
gaccatgtctccatgaagaattgcagcgacgggctgattgacgccatcgagggctccacg
ggcatcagcatcaccaacagccacttcaccgatcacgatgaggcgctgctctttggtgcc
aatgatttagcgacttacgatgacaaaatgcaagtgacggtagctttcaaccattttggg
aagagactggtgcagagactgccacggtgcagatttggatattttcacgtggtgaacaat
gactacactcattggaaaatgtatgcgattgggggaagcagtcatcccaccatcattagc
cagggcaacagatttgtggcggatcacccttttgcgaagcaggtgacgaagagggagaag
tctccagaatcagagtggatgaaatggacatgggtatcagagggagacctatttttgaga
ggtgcatattttgtggaatcgggcgataaggattggacgaagaaacatccggagctgtat
gacaagattatggcagctccagcaaaacatacagcagaaatgaccaaatttgcaggcgtt
cttggttgtacggtgggagaaccatgctaa
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