Salvia miltiorrhiza (redroot sage): 130991399
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Entry
130991399 CDS
T09291
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00052
Galactose metabolism
smil00511
Other glycan degradation
smil00531
Glycosaminoglycan degradation
smil00600
Sphingolipid metabolism
smil00604
Glycosphingolipid biosynthesis - ganglio series
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
130991399
09103 Lipid metabolism
00600 Sphingolipid metabolism
130991399
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130991399
00604 Glycosphingolipid biosynthesis - ganglio series
130991399
00511 Other glycan degradation
130991399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
130991399
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
130991399
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130991399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
130991399
NCBI-ProteinID:
XP_057771590
LinkDB
All DBs
Position
1:51310626..51319042
Genome browser
AA seq
689 aa
AA seq
DB search
MARNRTLRRATPLIFTFFIALFVLGVFAPLPSTSHNSPQFQLDNGYTHKFEIAEDMFWRD
GEPFRIIGGDLHYFRVHPEYWRDRLLRAKALGLNTVQTYVPWNLHEPKKGHLVFEGIADI
ISFLELCKELDMLVMLRAGPYICGEWDLGGFPAWLLAEEPAIRLRSSDPAYLGLVEKWWG
ILLPKVSPLLFSNGGPIVMVQIENEFGSYGDDKAYLHYLVKLARRHLGDDIILYTTDGGA
RENLEKGTIRGDAVFSAVDFSTGADPWPIFKLQKEFNAPGRSPPISTEFYTGWLTHWGET
IASTDAVFTATYLEKILSKNGSVVLYMVHGGTNFGFYNGANTGDDESAYKPDLTSYDYDA
PISESGDVDNAKYKALRSVIAKYSPQPLASVPSNNEKIAYGRIKLDKSSFLYDATRMKDL
ADVVESENPLSMEAIGQMFGFVLYASEYSPKGNGSVLSIPKVHDRAQVFVSCAEDSGRRP
TYVDVITRWSNRPVHLPPLKCKTKNQLFILVENMGRLNYGPYIFDRKGILSPVYLDGRQL
HKWKMLPISLDNLNEALNINPIIHDATSAQFLKRSAREKLKGQKKLGLEPAFYSGRFNIT
KVGDTYISFRGWSKGIAFVNEINIGRFWPSAGPQCNLYVPAPILRQGENTVVVLEVESPK
LDLFVSFVNYPDFTCGSKPRGLRRVLAMA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaccgaaccctaaggagagctacgcccttaatatttactttcttcatagcc
ctctttgtcttgggtgtttttgctcctctgccgtccacttcccataattctccccaattt
caactggataatggatacacacataagtttgagattgcagaggacatgttttggagagat
ggggagccatttaggataattggaggagacttgcattatttccgagtgcatcctgagtac
tggagagatcgactgctgagagctaaggcgttgggcttgaacacggtccaaacttatgtt
ccctggaacttacacgagccaaagaaaggccatctggtatttgagggcattgcagatata
atttcatttcttgagctatgcaaggaattagatatgttggttatgctgcgtgccgggccc
tatatctgtggcgagtgggatttgggtggcttccctgcatggttgctagctgaagagcct
gctattagactaagatcatcggaccctgcctaccttggattggttgagaagtggtggggc
atcctacttccaaaagtgtctccgcttcttttcagcaatggtggtcctattgtaatggtt
cagattgaaaatgaatttggttcttatggcgacgacaaagcttacctgcattatctggtc
aaactagctagaagacatcttggagatgatataatactgtatacaactgatggtggtgct
agggaaaatctggagaaaggaacaattcgaggagatgctgttttctcagcggttgacttc
agcactggagccgacccatggcccatattcaagctgcagaaagagtttaatgcaccggga
agatcgcctcctatatcaacggagttctatactggttggcttacacactggggggagact
attgcaagcactgatgctgttttcactgctacctacttggaaaagattttatcaaagaat
ggatctgttgttctctatatggtccatggtgggacgaactttggattctacaatggtgct
aatactggagatgatgagtctgcctacaagccagatcttacatcctatgattatgatgca
ccaataagtgaatcgggtgatgtggacaatgccaagtacaaagctctgagaagtgtcatc
gcaaaatatagcccgcagcctcttgcttccgtcccttccaacaatgaaaagatagcttac
ggacgtatcaagctagacaaaagttcgtttttgtatgacgcaaccaggatgaaagacctt
gctgacgtcgtagagtctgagaacccactttcaatggaagctattggacagatgttcggc
tttgtgttatatgcctccgagtacagtccaaaaggcaatggaagtgtgttatccatacca
aaggtgcatgatagagctcaagtgtttgtttcctgtgctgaagatagtgggaggaggccg
acgtacgttgatgtcatcacaagatggtcgaatagacccgttcatctgcctcccttaaaa
tgtaaaacgaaaaatcaactctttatcttggtcgaaaacatgggccgcttgaactatgga
ccgtatatattcgacagaaagggcattttgtcacctgtatatctggatggaaggcagctg
cataagtggaaaatgcttcccatttcccttgataatctcaacgaagctctgaacatcaac
cccatcattcacgatgcaacgagtgcacaatttctcaaaagatctgctcgcgaaaagttg
aaaggccaaaagaagcttggtctggaaccagcattttacagcggtcgcttcaatattacc
aaagtcggagacacatacatatcattcagaggatggagcaaaggaatcgctttcgtgaat
gagatcaacattggacgtttttggccgagtgctggaccacaatgcaatctttatgttcca
gctccgattctccggcaaggagaaaacaccgtggttgtgttggaggttgaatcgccaaag
cttgatctcttcgtgagcttcgtcaactacccagatttcacttgtggctcaaagcccaga
gggctccgacgtgtactggcaatggcatag
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