Salvia miltiorrhiza (redroot sage): 131001426
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Entry
131001426 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3 isoform X1
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
131001426
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131001426
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131001426
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131001426
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131001426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
COP23
HrcA_DNA-bdg
Motif
Other DBs
NCBI-GeneID:
131001426
NCBI-ProteinID:
XP_057783803
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All DBs
Position
8:complement(16415926..16421052)
Genome browser
AA seq
367 aa
AA seq
DB search
MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLIEYYSNNKN
PADAEENLLTCLADLFLQISSQKKKTGVLAPKRFVQRLKKQNEIFRSYMHQDAHEFLNYL
LNELVDILEKEARAAKSQEISPKIANGPTTISSNGPLREPVVTWVHKNFQGILTNETRCL
RCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK
IKRPPQILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADAEYSLFAVVVHVG
SGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYERLD
ASSSNTS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcggggtcgaagctggagaaggcattaggagaccaatttccggaaggcgag
cgttatttcggtctcgagaacttcggcaacacttgctactgcaacagcgtgcttcaggct
ctttatttttgtgttccatttcgtgagcagttgatagaatattattccaacaacaaaaat
cctgctgatgctgaagaaaatctcctgacatgcttagcagacttgtttttgcagataagc
tcacaaaagaaaaaaactggtgttcttgctccaaagcgtttcgtacagcgactgaagaaa
caaaatgaaatttttcgcagttatatgcaccaggatgcccatgaattcttgaactatttg
ctaaacgaactggttgacatactggagaaagaggctcgagctgctaagagtcaagaaatt
tccccaaaaattgcaaatgggccaacaactatatcttcaaatggtcccctaagggaacct
gtagttacatgggtgcacaagaattttcagggtatattgacaaatgagacaaggtgtttg
cgttgtgagacagtaacagcaagggatgaaacatttcttgacttgagccttgatatagaa
cagaacagttcaattacaagctgtttgaaaaattttagctccactgaaacactaaatgcc
gaggacaaatttttttgtgacaaatgctgcagtttacaagaagctcagaaaagaatgaag
atcaaaaggccacctcaaatcttggtgatacatttgaaaagattcaagtacattgaacaa
ctggggcggtacaagaagttgtcataccgtgttgtcttcccgcttgagctaaagctcagc
aatacggttgaggatgcagatgctgagtactccttattcgctgtagttgtccatgtagga
agtgggcccaaccatggacactatgtcagccttgtgaaaagtcacaaccattggttattc
tttgatgacgaaaatgtggagatgatagacgaatccgcagttcagacgtttttcggatca
gcacaagagtattctagtaatacagatcatggatacatcttattttacgaaagactcgat
gctagtagcagcaacacaagctga
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