Salvia miltiorrhiza (redroot sage): 131005862
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Entry
131005862 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131005862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smil02000
]
131005862
04147 Exosome [BR:
smil04147
]
131005862
04090 CD molecules [BR:
smil04090
]
131005862
Enzymes [BR:
smil01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
131005862
Transporters [BR:
smil02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
131005862
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131005862
CD molecules [BR:
smil04090
]
Proteins
131005862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
DUF87
AAA_18
Motif
Other DBs
NCBI-GeneID:
131005862
NCBI-ProteinID:
XP_057788946
LinkDB
All DBs
Position
1:complement(73661649..73671932)
Genome browser
AA seq
1399 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYTDMGTGEAEPVEMEEEMDAENEEMEP
PPAAVPFSQLFACADQLDWALMFVGSLAAAAHGTALVVYLHYFAKIIQLLRHDYSDELFD
RFTELALSIVYIAVGVFVAAWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNN
GDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFVNCWQIALITLATGPLIVAA
GGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYSFTNETLAKYSYATSLQATLRYG
ILISLVQGLGLGFTYGLAICSCALQLWVGRSLVTHGRAHGGEIITALFSVILSGLGLNQA
ATNFYSFEQGRIAAYRLFEMITRSSSTVNHDGLTLPSVQGNIEFRNVYFSYLSRPEIPIL
SGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI
GLVTQEPALLSLSIKDNIAYGRNASIDQIEEAAKIAHAHTFISSLEKGYDTQVGRASLMM
TEEQKIKLSVARAVLSNPSILLLDEVTGGLDFEAERSVQEALDVLMLGRSTIIIARRLSL
IKNADYIAVMEEGQLVEMGTHEELMNLDGLYAELLKCEEATKLPRRMPMRTYKESSTFQV
EKDSSASRIFQEPSSPRMAKSPSLQRVAGGHMVRPADVSYSSQESPRVLSPPPEEMMENG
ASMEMTDREPTIERQDSFEMRLPELPKIDVNSGQRQKSASDPESPVSPLLTSDPKNERSH
SQTFSRPLSQFDDIPMTMKESKGTSLEEPSLWRLVELSLAEWLYAVLGSTGAAIFGSFNP
ILAYVIALVVTAYYRKDGHKNHTHEEINRWCLIITGMGIVTVVANFLQHFYFGIMGEKMT
ERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIV
AVLIGMFLQWRLALVALATLPILMVSAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIY
TVVAFCAGDKVMELYRVQLRKIFKKSFLQGMAIGFAFGFSQFLLFACNALLLWYTALCVK
RRYMSLGTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRTPKIDPDDNSA
LKPANVYGSIELKNVDFSYPTRPEVLVLSNFSLRVNGGQTIAVVGVSGSGKSTIISLIER
FYDPVAGQILLDGRDLKSYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKE
AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIE
SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDTLMAKNSL
YVRLMQPHFGKGMRQHRLI
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctccaggggtttgttcgggtggtccccgccgcacatacagccgctgacgccg
gtgtcggaggtgtcggagccgccggagtcgccctcgccgtacacggatatggggacgggc
gaggcggagccggtggagatggaggaggagatggacgccgagaacgaggagatggagccg
ccgcctgcggcggtgccgttctcccagctgttcgcctgcgcggaccagctcgactgggcg
ctcatgtttgtcggatctcttgctgcggctgcgcacggcaccgcgcttgttgtctacttg
cattattttgctaagattatacagttgctccggcatgactatagcgatgagctgttcgac
aggttcactgagcttgctttaagcattgtatatattgccgtgggagtttttgttgcagcc
tggatagaggtgtcatgctggatacttactggggaacggcagactgctgtgataaggtcg
aaatatgttcaagttctacttaatcaggacatgagtttttttgacacctatggaaacaat
ggagacattgtgagccaagtactgagtgatgtgctgctcatccaatccgctctcagtgaa
aaagtggggaactatattcataatatggctactttctttagtggtcttattattggattt
gtcaactgctggcagattgccctaattactttagctactgggccactgatagttgctgca
ggagggatttcaaatatctttttgcatagacttgctgaaaatatccaagatgcttatgct
gaggcggcaagcattgcggagcaggcggtctcttatatcagaaccttgtactcatttacc
aatgaaaccttggcaaaatattcatatgcaacttcacttcaagctactcttagatatgga
atattgataagtcttgttcaagggcttggacttggtttcacgtatggacttgcgatctgt
tcttgtgccttgcaactttgggtgggaaggtcccttgtcacacatggaagagctcatggt
ggagaaattataactgctctattttctgttatattaagtggccttggactgaatcaagca
gctacaaacttttattcttttgaacaaggcagaattgctgcctacagactatttgagatg
ataactcggtcatcctccactgttaatcatgatgggttaactcttccttctgttcaaggg
aacatagagtttcgaaatgtatattttagctatttgtcccgccctgaaatcccgattttg
agtgggttttatctcactgtgcctgctaaaaaggctgtagcacttgttggcagaaacggc
tctggaaaaagcagtatcataccacttatggagcgattttatgaccctaccttaggtgaa
gttcttttggatggcgaaaatataaagaacctcaagctggaatggctaagaagccaaatt
ggtttagttacccaggaacctgctttactgagtctgagtatcaaagataacattgcttat
ggacgaaatgcttctattgaccaaattgaagaagctgctaaaatagcacatgcacataca
tttattagctctctcgaaaaaggatatgatactcaggttggtagggcctctctgatgatg
acagaggagcagaagattaaactttctgttgctagggctgtgctgtcaaatccatctatt
ctgctcctggatgaagtcactggtggacttgattttgaggctgaaagatctgttcaggaa
gctctggatgtcctcatgttgggcagatcaacaataataatagctagacggctaagtctt
attaagaatgctgattatattgctgtaatggaggaaggtcaactcgttgaaatgggtaca
catgaagaattaatgaacttggatggcctttatgcagaactgctcaaatgtgaagaagct
actaaacttccacgaaggatgccaatgagaacgtacaaggaaagctcaacttttcaggtt
gagaaagattcttctgcaagtcgcatctttcaagaaccatcatccccaagaatggctaag
tcaccatctctccagagagttgctggcggtcatatggttcgacctgctgatgttagttat
agctctcaagagtctccacgagttcttagtccacccccagaagaaatgatggaaaatggt
gcttccatggaaatgacagatagagaaccaacaatagagaggcaggatagttttgaaatg
agactgccagaattacccaagatcgatgttaattctggtcagcgacaaaaaagtgcttct
gatcctgaatctcctgtttctccgcttttgacatccgacccaaaaaatgaacgttctcat
tcacaaacctttagtcgaccactcagtcaatttgatgatattcctatgacaatgaaagaa
agcaagggtacatctctagaagaaccatccctctggaggctagtagaacttagccttgca
gaatggctttatgctgttcttggaagcactggtgctgcgatctttggttcttttaatccc
atccttgcttatgttattgcacttgtagtaacagcgtattacagaaaagatggacataaa
aatcatacacatgaagaaattaacaggtggtgcttaatcataactggcatgggaattgtg
acggtggttgctaattttttgcagcacttctactttggtataatgggagaaaagatgacc
gagcgtgttcgaagaatgatgttttcagcaatgcttcgtaatgaagttggatggtttgat
gaagaggaaaatagtgctgataacctgtcaatgcgattggccaatgatgctacttttgtg
agagctgcttttagcaaccggctttcaatattcatacaagatagtgcagctgttatagtt
gctgtcctcattgggatgtttctgcagtggcgactggcactcgtggccttggctactttg
cccattcttatggtttctgccatagcacagaaactatggcttgctggattttcgaagggt
atccaggagatgcataggaaggcatctttggtcttggaggatgctgttcggaatatctat
actgttgtagcattttgtgctggtgacaaggtgatggagctctacagagtacaacttcgg
aagattttcaagaaaagctttctccaaggcatggcaattggttttgcgtttggcttttct
cagtttcttctgtttgcgtgcaatgctctccttctttggtacactgctctttgtgtgaaa
aggcggtacatgtctctggggacagctctaaaagagtacatggtattctcttttgcaaca
tttgcactagttgaaccttttggtttggccccgtatattcttaaaaggaggaagtccctg
atatccgtgttcgagataattgatcgaacccctaagattgaccctgatgataattctgcc
ctaaagcctgcaaatgtttatggaagcattgagttgaaaaatgttgacttttcgtatccg
actaggccggaagtcttggtgctcagcaatttcagtctcagagttaatggtgggcaaacc
atagcagtggttggtgtttcagggtcgggaaagagcaccattatatctttgatagaaagg
ttttatgatccagttgctggtcagatattactagatgggcgagatttgaaatcttataat
ttgagatggttgaggaaccacttaggtcttgttcagcaggagcccatcatattctcgaca
accatccgagaaaatatcatatatgcaaggcataatgcaagtgaagcagaaatgaaagag
gctgcgaggatagcaaatgctcatcattttataagcagcttgcctcatggttacgacacc
catgtaggtatgaggggtgtggatttgactcctggacagaagcagaggattgcaattgct
agagttattttaaagaatgcacccattttgttgttggatgaagctagctcatcaatagaa
tctgaatcgagccgggtagttcaagaagctctagacactcttattatggggaacaaaaca
accattcttattgcacatcgagcagccatgatgagacatgttgacaatatagttgtactc
aatggtggacgaatagtggaagaagggactcatgatacgctgatggcaaagaacagttta
tatgtacgcttgatgcaacctcactttggtaaaggaatgcgccaacataggcttatttag
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