Salvia miltiorrhiza (redroot sage): 131006521
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Entry
131006521 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2 isoform X1
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131006521
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
131006521
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131006521
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131006521
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
131006521
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
131006521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
HAUS-augmin3
HTH_63
Motif
Other DBs
NCBI-GeneID:
131006521
NCBI-ProteinID:
XP_057789654
LinkDB
All DBs
Position
1:complement(9199944..9203454)
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLDNLRPVYGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILMNSPDVDIGPELSALKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQRASGKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGPCPVGGQGDIEWLRLVQPVIQERIERYSQNEIRFNLMAIIKNRKEIYTAELKELQRKR
ERILQQLGALQSERMVDGSTVEALNMSLSEINAGIEAATEKIVMEEEKFKKWRTENIRRK
HNYIPFLFNFLKILAEKKQLRPLIEKAKQKSSKS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcactattgaatcggatcctggtgttttcacagaacttatacagcagatg
caagtgaaaggtgttcaggttgaggagttgtattctttggatcttgattcactagacaat
ctaaggccagtttatgggctaatattcctctttaaatggcgtccgggagaaaaggatgac
cgccttgtaataaaggatccaaacccaaacttgttttttgccagccaggtaataaataat
gcctgtgcaacccaagcaatcctatcgattctgatgaacagtcctgatgttgatattggg
ccagagttgtcagcgctgaaggaattcacaaaaaacttcccgcccgagcttaaagggttg
gctatcaataacagcgaagcaatccgcacagcgcacaacagtttcgcaagacctgagccc
tttgtacctgaagaacagagagcatctgggaaagacgatgatgtatatcacttcataagc
tatataccggttgatggggtactttatgagcttgatggcctgaaagagggacctataagc
ctggggccgtgccctgttggaggacaaggcgatatcgaatggctacgcttggtacaacct
gtgattcaggagcgcatcgagagatattcccaaaatgaaataagattcaatctgatggcc
ataataaagaacaggaaagaaatttatacagctgagctcaaagaactccaaaggaagagg
gaacggatcctccaacaacttggcgcgttgcagtcagagagaatggtggacggaagtact
gtggaagcgcttaacatgtcgctttcagagataaatgctgggattgaagctgcgactgag
aagattgtgatggaggaggagaagttcaagaaatggagaaccgaaaacattcgtcgaaag
cacaactacataccctttctcttcaacttcttgaagattcttgctgaaaagaagcagttg
agacctctcatagaaaaggccaaacagaaatcctctaaatcttga
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integrated database retrieval system
