Breviolum minutum: v1.2.027872.t1
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Entry
v1.2.027872.t1 CDS
T04349
Symbol
symbB.v1.2.027872.t1
Name
(OIST) -
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smin
Breviolum minutum
Pathway
smin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
v1.2.027872.t1 (symbB.v1.2.027872.t1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smin02000
]
v1.2.027872.t1 (symbB.v1.2.027872.t1)
04147 Exosome [BR:
smin04147
]
v1.2.027872.t1 (symbB.v1.2.027872.t1)
04090 CD molecules [BR:
smin04090
]
v1.2.027872.t1 (symbB.v1.2.027872.t1)
Enzymes [BR:
smin01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
v1.2.027872.t1 (symbB.v1.2.027872.t1)
Transporters [BR:
smin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
v1.2.027872.t1 (symbB.v1.2.027872.t1)
Exosome [BR:
smin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
v1.2.027872.t1 (symbB.v1.2.027872.t1)
CD molecules [BR:
smin04090
]
Proteins
v1.2.027872.t1 (symbB.v1.2.027872.t1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Prenyltrans
SMC_N
AAA_16
AAA_22
RsgA_GTPase
AAA_29
AAA_7
AAA_5
AAA_30
DEAD
MMR_HSR1
Rad17
Zeta_toxin
AAA_15
SbcC_Walker_B
AAA_18
DUF815
ABC_ATPase
AAA_21
AAA_33
Methyltransf_33
Motif
LinkDB
All DBs
AA seq
1510 aa
AA seq
DB search
MAAVVLNGPDTLTSEDQHACEENVLTFFKHAWLSGSQEDIVINRELHMSWLKKGFTSLPP
NFAGLDASRPWFVFWISHAMEILGDFDEQRWSPQVASFLSHCQDSTGGFAGGPSQLPHLA
PTYAAVSALMVAGTEEAYKVVNRATMYGFLMRMKSPQGGFKMHDEGETDMRGCYCAIATA
SMLHILTDELMEGVPEYIRRCQTWEGGIAGEEGLEAHGGYSYCGLATLCIAGKADALDLH
AFLKWAVNKQMSNEGGFQGRANKLVDSCYSFWQGAIFPLLHEAFRQSGTAKQLPVDNCWF
SPEPLLHSIILSRQSFDNLNPEPLQMYILLACQHPSGGLRDKPMKSADFYHTCYALSGMA
VSQYDVAGHTPMVGDLATNLLEQTDIYYNVLLEKAERKCSYFQNLSLEVDGRKLSGVEGP
GAVAWRKHLASTQKVMEVPSPIVCATFPFLACTAHCFAKQIERNMTEQTKNFARASTVAE
ESLMGVRTVSAFGTERFQLDRFDKELDAARRGGIRSGIRIGVFWGLQNFSFTCLYALTLW
FGGHVLISRRMEGHTDKDVNGGDVIVILIALITGMTGISQFSGYAPMLAKAVISAKSLKE
MIRWKDRDIEPEGFDDDETPNSLKDLQSIEFRNVGFSYPSRPEKMVLNKLSFFITKGQKV
AFVGESGCGKSTTIQLLERFYDPKHGEVLVNGLPLRHLPVRSWRKMLGYVGQQPVLFATS
AMENIKAGDNISDEAAIEAARQAQILDTLTALPDRLDTFLGSGGGTLSGGQRQRVAIARA
LAKKPKVLLLDEATSALDNESERQVQATLDSLDETLGKTLTTISIAHRLTTILNSDMIYV
LSEGHCVEQGTHQDLMARQGHYYNMASLQQAVAVKRTPEIQQHHRQVTRKSHADTRSSQP
DFGSGITSLGSLYQMGLDTGEDEDAVDCSSKKPSVLRRLCRAARPDWIVIPFGLLAVLLA
SSAAPMQAYFFNKALGSFYSHSLEEMLKELDKACLGLVVVGIVFGIAILIQNSLFTLLQE
GITIRLRKAAFGSTIRMHMAFFDTPENQTGSLLVSLERHMVRVSQIFGVNLANSMSAVLT
CLACVLLSFYGSWLLALVLLALLPISFGLSTTLATAAAKVDPKTEKAYSTASQTTTEAVT
SIRTVRALRAEEHTLDVLTGWLQVVANFNRSMSVRRAFAFGFTVSMVSVIYLCGFWLSAV
MINSRMFDPSSVLLTLFSVIFGVMYVSALAMYLPDSASGVEAAKEVFRLVDQSSKIDAVE
PEGEICTLGDGSICLKEVSFYYPHRSEVMVLRRLSLNIRKGQKVALVGYSGSGKSTVIQL
LLRFYDPQEGLITVGGRDLKHLDVSWWRKQIGLVSQQPMLFDMTLEENVKYGCDEATHEK
VVQAARLANMDYVFDGSRQWSDRVGLKGEQLSGGQRQRCAIARAMVRNPQILLLDEATSD
LDSTSEALVQAALERASKGITSITVAHRLSTIRDADRIFVLVEGQVMEQGTYTELVSLGG
NFAKLAARSL
NT seq
4624 nt
NT seq
+upstream
nt +downstream
nt
tgtgtatccgtccgtcggacatagccatggcagcggttgtcttgaacggcccagacacct
taacgtcggaagatcagcacgcctgtgaggagaacgttttgaccttcttcaagcatgcat
ggctcagtggctcccaggaagacattgtcatcaaccgcgagttgcatatgagctggttga
agaaaggctttacatctttgcctccaaactttgcgggtttagatgcttcaagaccttggt
ttgtcttttggatctcccatgctatggagattctgggcgactttgatgagcaacgttggt
cacctcaggtagcttccttcttatcacattgccaggattcaactggtggctttgctggcg
gtccatctcagcttcctcatttggcacctacctatgcagcagtttcagcactaatggttg
ctggtactgaagaggcatataaggtggtgaaccgtgctacaatgtatggctttttgatgc
ggatgaagagcccacaaggtggctttaaaatgcatgacgaaggtgaaacagacatgcgag
gctgctattgcgctatcgccacggcctccatgttgcacattttgacagatgagttgatgg
aaggagtcccagaatacatcagaagatgtcagacttgggaaggcggcatagcaggtgaag
agggtttggaagcgcatggtggctattcgtactgtggcttagctaccctttgcattgccg
ggaaggcagatgccttggatttgcatgcctttctgaagtgggcagtcaacaagcaaatga
gcaatgagggcggctttcagggacgtgccaacaaactagtggattcctgctactcgttct
ggcagggtgcgatcttccctttgctgcatgaagctttccgccagagtggcacagcgaagc
agctgcctgtggacaactgttggttctcacctgagcctttgttgcatagcatcatccttt
cccgtcaatcctttgacaatttgaatcctgagcccttgcagatgtacatccttttggcat
gccagcatccttccggaggtttgagggataagcccatgaagtcggcagatttctaccaca
cctgctacgccctgagtggcatggcagtcagccaatacgatgtggcagggcatacgccca
tggtgggtgatctggccaccaaccttttggagcaaacggacatttattacaacgtcttgc
tagaaaaggccgaacgtaaatgcagctactttcagaacttgtccttggaagtggatggcc
gcaagttgtcaggggtagaaggccccggtgcagtggcttggaggaaacatctcgcaagca
ctcagaaagtcatggaagtgcctagcccgatcgtctgtgccacctttccatttctggctt
gcacagcccattgctttgccaaacagattgaacggaacatgacggagcaaaccaagaact
ttgcacgtgccagcacggtggcggaggagtccttgatgggcgtccgcacggtgtcggcct
ttggaacggagcgctttcaactggatcgcttcgacaaggagttggatgcggccaggagag
gcggcattcgatccggcatccggattggtgtcttctggggcttgcagaacttctccttca
cttgtctctatgcgctgaccctctggtttggagggcatgttcttatctcacggcggatgg
aaggtcacacagataaagatgtgaatggtggggatgtcatcgtgatcctcattgctctca
tcactggcatgacagggatctcacagtttagcggctatgccccgatgttggccaaagctg
tgatctctgcgaaaagtttgaaggagatgattcgctggaaagatcgggacatcgaacccg
agggtttcgatgatgatgagacacctaacagtttgaaagacctgcagagtatcgagttcc
gcaacgtgggatttagctatcccagtcgtccggagaagatggtgttgaacaagctgagct
tcttcatcactaaaggtcagaaagtggcctttgtgggtgagagcggctgtggcaagagca
ccaccatccaacttctcgaacgcttctacgatccgaagcatggcgaggttttggtgaacg
gcctgcctttgcggcacctgccggtacgaagctggcggaagatgttgggctatgtggggc
agcaacccgtactttttgccaccagtgccatggaaaatatcaaggccggtgacaacatta
gcgatgaggctgccatcgaggcagcccgacaggcacagatcctagacacgctgacggcgt
tgcccgaccgcttggacacctttcttggttccggaggtggtaccttatcgggtggccaac
gtcaacgtgtggctattgcacgtgccttggccaagaaacccaaggtgctgctgttggacg
aagccacttcggccttggataatgagtcggaacgacaggtgcaggccaccctggactcgc
ttgatgagaccttggggaaaaccttgaccaccatttccatcgctcatcgcttgaccacca
tcctaaattccgatatgatctatgtgctctccgagggccactgtgtggaacagggaaccc
atcaggacctgatggcgcggcaagggcattactacaatatggcttccttgcagcaggctg
tagcagtgaagcgcacaccagagatccagcagcatcaccgtcaggtcacaaggaaaagcc
acgcagacacccgatcgagccaaccagattttggatctggcatcacgagcttgggttctt
tgtatcaaatgggtctcgatacgggggaggatgaggatgcggtcgattgttcttcgaaga
aaccttcggtgttgcggcgcctatgtcgtgcggcgcgacctgattggatcgtcataccct
ttggcctgctggcggttttgctagcatcttccgcagcgccgatgcaggcctacttcttca
ataaggccttagggagtttctattcccattccctggaagagatgttgaaagaactggaca
aagcttgccttggccttgtggttgtgggcatcgtcttcggcattgccatcttgattcaga
acagcttattcaccttgctgcaggagggcattacgatacgtctccgaaaagccgcctttg
gcagcaccattcggatgcacatggctttttttgacacgccagagaaccaaactggcagcc
tgttggtctcactggagcggcatatggtgcgcgtttcgcaaatctttggtgtgaacttgg
caaacagcatgagcgcagtgctcacctgcttggcttgtgtcctcttgagtttttatggat
cgtggcttttagctctggttttgctggcgctgcttccgattagttttggcctcagtacta
ccctagccacggcggccgcaaaagtggacccgaagactgagaaggcttactccacagcat
cccagaccaccacagaggccgtgaccagcatccgcaccgtgcgtgcattgagagctgagg
aacacaccttggatgttttgaccggttggctccaggtggtggcaaactttaaccgatcaa
tgtcggttcgaagggcatttgcctttggctttactgtcagcatggtttctgtgatttatt
tgtgtggcttttggttgagcgctgtgatgatcaatagccggatgtttgacccgtcttcgg
tgttgctgacgctcttcagcgtcatctttggagtgatgtatgtgagcgctctggccatgt
atttgcccgatagtgcctcaggggtcgaggcagccaaggaggttttccgcctcgttgacc
aaagctccaagatcgatgctgtggaaccagagggtgagatttgtacattgggagatggaa
gcatttgccttaaggaggtatccttctactatccgcaccgttcagaagtcatggtcctgc
ggcggctttccctaaacattcgcaagggtcagaaggtggctttggtgggatactctggca
gtggaaagtccacagtgattcagctgctcttgaggttttatgatcctcaggaaggtctca
tcaccgtgggcggaagggacttgaaacacttggatgtgagctggtggcggaagcaaattg
gcttggtcagtcagcagccaatgctttttgacatgaccctagaggagaacgtgaaatacg
gatgcgatgaggccactcacgagaaagttgtccaggcagcgcgcctggcgaacatggatt
atgtctttgatggctccaggcaatggtctgaccgtgtgggattgaagggagaacaactga
gtggtgggcaacgccaacgctgcgccatcgcccgtgccatggtgagaaatccccagatct
tactgttggatgaggccacttcggatttggattccacttccgaggcattggtccaagcag
ccttggagcgtgccagcaagggaatcaccagcatcaccgtggcgcatcgtctctcaacga
ttcgagatgcggatcggatcttcgtgctggtggagggccaggtgatggagcagggaacct
atacagagttggtgtcactgggtggaaacttcgccaagttggcagctagaagcttgtgag
ttccggagtgaagcctaccagggtggagctgcggttgaaacgccaatgatttcgagaagt
gatc
DBGET
integrated database retrieval system
