Salegentibacter mishustinae: LDL76_05025
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Entry
LDL76_05025 CDS
T07820
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis00521
Streptomycin biosynthesis
smis00523
Polyketide sugar unit biosynthesis
smis00541
O-Antigen nucleotide sugar biosynthesis
smis01100
Metabolic pathways
smis01110
Biosynthesis of secondary metabolites
smis01250
Biosynthesis of nucleotide sugars
Module
smis_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LDL76_05025 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDL76_05025 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDL76_05025 (rfbC)
Enzymes [BR:
smis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LDL76_05025 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UBZ08074
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All DBs
Position
complement(1070374..1070919)
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AA seq
181 aa
AA seq
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MKVEETPLKDCFIIKPDIFRDKRGLFLESYHKKKFIELTGIEKEFVQDNQSISKKGVLRG
LHYQTGEFGQTKLVRAIYGKVLDVVVDLRPESPTFKQSFKIILDHENLYQLYIPKGFGHG
FVTLSETSVFAYKCDEYYYPGSEAGIIYNDPDLAIDWEFPEEKMIISDKDLKQPCLKEVF
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgaagaaacgcctttaaaagactgctttatcataaaaccagatatttttcgg
gataaacgcggcctttttctggagagctatcacaagaaaaaatttatagaattaacaggg
attgaaaaagagtttgttcaggataatcaatctatttccaaaaaaggggttttacgtggt
ttgcattaccaaaccggggaatttgggcaaactaaactggtgcgtgctatttatggaaaa
gtgctggatgtagtggtagatttaagaccggaatcaccaacttttaagcagagtttcaaa
attattcttgatcacgagaatttataccagctctatattcccaaaggatttggtcacggc
tttgtaacgctttctgaaacctcggtttttgcttacaaatgcgacgaatattattatccg
ggttctgaagcaggaataatttataacgatccagacctggcgatagactgggaatttccg
gaagaaaaaatgattatttcagataaagatttaaaacaaccgtgcttaaaagaggttttt
aaatga
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