Schistosoma mansoni: Smp_015220
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Entry
Smp_015220 CDS
T01095
Name
(RefSeq) transcription initiation factor, putative
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
smm
Schistosoma mansoni
Pathway
smm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smp_015220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_015220
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_015220
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Smp_015220
Coactivators
SAGA/TFTC/STAGA complex
Smp_015220
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
Smp_015220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
8349271
NCBI-ProteinID:
XP_018646395
UniProt:
G4LYR1
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MVNQVYLLPKSGITNNVLPSAPSVMQVRSLAVGQTVLQPNGVLATTPVMPRVVTSQLGSS
TKLVGFFNQLLELSKNVSVSTHSSVATLIQALVNGELDASSFSAQLRSNLKSANPGMDLA
PFIKDNIDLLRRDLANGVCRLPNIQPPPKDIFTGVPTAVPVSIVTTLPTLGLQPRSNAAV
STTLVSSAVPAGPRITLPTNTTPRIVGTLMSSVSSPVIPSSPVTVPTPRTQPPLLAPAPP
RTCITSATNYDAASSPNTGAKYRLAQSFSGVSSSASVVSNATAATVVSTRFTSTINGTRP
NYQNLRPIIASSTSATLGINLASIKSVAGVSASVPPIIRAKSGYVNTYSPGILPAVHSKV
GSNLLSLNGSTVLIEGVDRKQNDLSFLSDDIRHPPMSPTRDNPFFPSEKVKEILESHGIK
TLTEESIVSLAHGLQIFIKNLLSKLRIVVSHRLDRLGEDSRLVQTDHTREQLRFLQKLDE
HDRMRQSELEKDLILKAAKSRSRNEDPHQMQMREMARRIASEDYEREKQHQANLTALHAI
GPQRKRRLDTLDEMGNPISTDILGASLSTRDGVTNLVSALPASTANRLSIVSASRLGLVT
SGPNLTQLSLEALPANSSSLVSSVGGTGDSVSNTSGFSLALSLRAHRATLRDIQVILSRT
PRLRRTRTYYRTYWRSQP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggttaaccaggtgtacttgcttcctaaatctgggataactaataatgtccttccaagt
gctccgagtgtgatgcaagttaggagtttggcagttggacaaactgtactccagccaaat
ggtgtgcttgccaccactcctgttatgccaagagttgtcacatctcagttgggttcctca
actaaattagtgggattttttaaccaattgctagaactatcaaagaacgtctcagttagc
actcacagctcagtagcaacgctaattcaagcattagtgaacggagaacttgatgccagt
tcgttcagtgcacaactacgtagcaatcttaaaagtgccaatcctggtatggacctcgcc
ccattcataaaggacaacatagatttacttagaagagatctagctaatggtgtctgtcgt
ctcccaaacatacaacctcctccaaaagatatcttcacaggtgtacccacagcagttcct
gtctctatcgtaacaacattacctaccctaggtcttcagccccgctctaatgccgcggtt
tccacaacactagtttcttcagcagtacccgctggtcctcgtattactctgccaacgaat
acaactcctcgcatagtaggcacactcatgtcatcagtttcgtcgccagttattccaagt
agtcctgtcactgttccaacacctcgaacacaacccccactattggctcctgctcctccc
cggacatgtattacatctgccacaaactatgatgcagcttcaagtcctaacaccggtgca
aaatatcgtttagctcagtcttttagtggtgtttcatcttcagcgtctgtcgtatctaat
gcaaccgctgcaacagtggtctcgacacgtttcacatcgactattaacggtacgcgtcca
aactaccaaaacctacgaccaattattgcttcgtccacttccgcaacattgggtatcaac
ctagcatcgataaaatcagttgctggtgtttctgcatccgtaccccctataattcgtgct
aaatctggatacgttaacacttattctcctggaattctacccgctgttcacagcaaagta
ggctccaatctcctctccttgaatggatcaactgtactaatagaaggtgtggaccgaaaa
cagaatgacctctcgtttttgagcgatgatatccgtcacccccctatgtcacctacacgt
gacaatccatttttcccatcagaaaaagttaaggaaatattagaatctcatggcataaaa
acactaacagaagaatctatcgtgtctctcgcccacggtttgcaaatattcatcaaaaat
cttttatcaaagttgaggattgtagtatcacatcgtctcgatcgtttaggcgaggattct
cgtttggttcaaacagatcacactcgtgaacaattgagatttcttcagaagttggatgaa
catgaccgaatgaggcaatcggaattagaaaaggatctaattttgaaagctgcaaaatcg
cgttctcgaaacgaagatcctcatcaaatgcagatgagggaaatggctcgacggatagca
tctgaagattatgaacgtgagaagcaacatcaagccaatcttacagctcttcacgctatc
ggcccacaacgcaagcgtcgtctagatactttagatgaaatgggaaaccctatttcaaca
gatattttgggagcctctctttcaacaagagatggtgtgacgaatttggtgagtgcccta
cctgcttctactgctaatcgcctttctattgtcagtgccagtcgactaggtttggtaaca
tcaggacctaacctaacgcagctcagtttagaagctttaccggcaaattcaagctcgttg
gtctccagtgtcggtgggactggtgatagcgtgtcaaatacgtctgggttttcattagca
ctcagtctcagggcacatcgtgcaactctcagagatatacaggtcatactttctcgcaca
ccgagacttcgtcgtacacgtacttactataggacgtattggcgctctcagccttaa
DBGET
integrated database retrieval system
