Schistosoma mansoni: Smp_174210.1
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Entry
Smp_174210.1 CDS
T01095
Name
(RefSeq) uncharacterized protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Pathway
smm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Smp_174210.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_174210.1
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_174210.1
Spliceosome [BR:
smm03041
]
Complex A
U2 snRNP components
U2 related factors
Smp_174210.1
Complex B
Smp_174210.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Katanin_con80
ResIII
Motif
Other DBs
NCBI-GeneID:
8344804
NCBI-ProteinID:
XP_018654341
LinkDB
All DBs
Position
W:18036935..18084249
Genome browser
AA seq
1328 aa
AA seq
DB search
MSEDPDDPDAHLPYQPTTEDSESLNAADINDPVEYDRIFKPHHTVPRSPSQVRAITSRRN
VSNEYATDPTTKLNFSLPPSSPNIVNPTTREAKCVQSNILSDRFTSDKPFTPPSTTSACM
SRRPHQTTISQAARIISDSPCPPEAIEVEDFLPHSLPTMMDLALNPVLQNIKNQTHDKSG
SLHEPSEAELLLRIRKPHDPFVKVMSSRVKGLSTVRVMWSPDSVKTAVESALMMNDTAIL
VDVLGILAKNSHVETTCQIVRVIIKNFAPVIRQTIEGPTPPGVDLMREERRRDDDHSRNR
KRRSRSRSPVLPRRAFSSTLEGSLPLAASLPTSSLMGSLLAAQAKAAEEAAAKAKAETSK
PAVGTMTAIANAAADMIKAARNSGQGIAGMEGALVITPNMDKDIEQRRLDLEMQKRRERV
ERWRRERRLKQDILAAQQRLAESTRGTTINKWNLEDDEDEEDANKKNIQMEKPTEDDDVD
PLDAYMQELNNQVSAGPETTKKDTKITKQSEMSLKTSKDTDHASSDPSVKPKQQLVIKRK
RIIGRGELMESNIDELEYSSEEEDTTIEDALAQLQKKDKLQPIDHSKIEYFPFRKNFYVE
VPELAKMSKEDVKAYRASLENIRVRGRECPKPLRNWVQAGISSRLLACLKRNNFDKPTPI
QCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQAPLNPGDGPIALLLAPTRELA
LQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRVT
NLHRCSYVVLDEADRMFDLGFEPQVMRIIENCRPDRQTLMFSATFPRQMEILARKVLTLP
IEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLELLGIYQEEGSVLVFVEKQESADELMRV
LLKYGYPCLSLHGGIDQYDRDSVIMDFKRGNIRLLIATSVAARGLDVTDLLLVINYDCPN
HYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSAGDVVRAFKQSGQKPPEELMNMWNAYKI
RMEHEGKKVYGSSGFRGKGFMFDEVEAQLNSEKRRLQKAALGLQDSDDEDGDGSVDWDSK
IEDMLATKTKIKDVSKGNAAESVSETAEVSAQAGQAVVNAALALARQKAAQLGLVKNLTS
GTPTVPQPSAVVNTTTVSDSNTGIAAAVAAVTIPVPPAPTSRTLAEQAAERLNAKLGYTK
QTPGAGDEDGAGANTSSGSDMVRRYEEELVINDFPQNVRWRITGREMLNHLSDYCDVGVS
VRGVYMPPAKAKQHIPEGTDDRPLYLCIEAVNERQVALAKKEIMRIIKEELVKLQSGNSI
NRGRYKVV
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggatcctgacgatcctgatgcacatttaccttatcaacctacaactgaggat
agcgaatcgctcaatgcagctgatataaatgatccagttgaatatgataggatatttaaa
ccacaccacacagtcccacgtagtccttctcaagtaagggctataacttctagaagaaat
gtttcaaatgaatatgcaactgacccaaccacaaagctaaatttcagtctccctccttca
tcaccaaacattgtgaatcccacaacccgtgaagcaaaatgtgtccaatcaaatatccta
tcagacagattcacttcggataaaccatttacacctccgagtaccacttcagcttgcatg
tccagaagacctcatcagactactatctcacaagctgctcgaataatttccgattctcca
tgcccaccggaagcaattgaagtggaagatttcttacctcattcactgccgactatgatg
gacttagcattgaatccagttcttcaaaatataaaaaatcagacacatgataaatctggg
agccttcatgaaccatcagaagcagaattgttattgcgaattcgtaaacctcatgatcct
ttcgtgaaagttatgtcatcacgtgttaaaggcttgtcaactgttcgtgtgatgtggagt
ccagatagtgtgaaaacagctgttgagtctgcattaatgatgaatgataccgcaatttta
gtcgatgtccttggaatattggcaaaaaacagtcatgttgaaacaacttgtcaaatagtt
cgtgtaataatcaaaaatttcgccccggtaattcgccaaactatcgaaggcccaactcca
cctggagtagacttgatgcgagaagaaagacgacgagatgacgatcattctcgtaacaga
aaacgtcggtcgcggtctcgttctcctgttcttccaagaagggcattctcatctacttta
gaagggtctctgcctttagctgcttcgttgccaacatcttcattaatgggttcgttactg
gctgctcaggcaaaggcagctgaagaagcggctgccaaagccaaggcagaaacgtctaaa
cctgcagttggtactatgactgctattgccaatgcagcagctgatatgatcaaagctgct
cgtaattctggtcaagggatcgcaggtatggagggtgctcttgtcattaccccaaatatg
gacaaagacattgaacagcgtcgccttgatcttgaaatgcaaaagagacgagaacgagta
gaaagatggcgacgagagagaaggctcaaacaagatattcttgcagcacaacaacgactt
gcagagagcaccagaggaactactattaataagtggaatctagaggatgatgaggacgaa
gaagatgcaaacaaaaagaatattcagatggaaaaacctacggaagatgatgacgtagat
ccactggatgcttatatgcaggagttgaataaccaagtttccgctggtcctgaaactact
aaaaaagatactaaaattactaaacaatctgaaatgtcactaaaaacttctaaagatacc
gatcacgcttcttcagatccttcggtcaaacctaaacagcagttagtaattaaacggaaa
agaattattgggcgaggtgaactgatggaaagtaatatagatgaattagaatattcatct
gaagaagaagacacaacaattgaagatgcattggctcagctacagaaaaaagacaaactt
cagcctattgatcattccaaaattgagtatttcccttttcgcaaaaatttttatgtagaa
gttccagaactagcaaaaatgtcaaaggaagatgttaaagcgtatagagctagtttagaa
aatatccgcgtccgtggtagagagtgccctaaacccctacgcaattgggtccaagcaggc
attagctctcgccttttggcttgcctaaaaaggaataatttcgataaacctactccaatt
cagtgccaggcgttacccgttataatgtctggtcgcgatatgattggtattgctaaaaca
ggaagtgggaaaactctagcttttctagtaccacttatgcgtcacttggaacatcaagct
cctctaaatcctggagatggcccaatcgcccttctattggcacctactcgggaactcgca
ctacaaatatttaaagaaacaaaaaagttgtgtcaggccgccgatgctcgcgctgtttgt
gtctatggtgggactggtattagtgaacaaattgctgaacttaaacgtggagcggaaatt
attgtctgtacacccggtcggatgattgatatgctcgctgcaaatggagggagagtaaca
aatttacatcggtgctcttatgtggttcttgatgaagcagatcgtatgttcgatttggga
tttgagcctcaagtgatgcggatcatcgagaattgtcgtcctgatcgccaaactttaatg
ttttcggctacatttcctagacaaatggaaatccttgcccgtaaagtgctaacgcttccc
atagaaatccaaatcggtgggcgatcggtggtgtgttcagacgtggagcagcatgcattc
attttgtcagaagaagagaaagtttacaaagttcttgaacttctaggaatttaccaggaa
gagggtagtgtccttgtattcgtagaaaaacaagagagtgcagatgaattaatgcgtgtt
cttttgaagtatggttatccatgtctttctcttcatggtggcattgatcaatatgatcgc
gattctgttataatggattttaaacgtggcaatattcgtcttttaatagccacctcagtt
gctgctcgtggtcttgatgttacagatttgcttttagttatcaattatgactgtccaaat
cactatgaggattatgttcatcgttgtgggcgtactggacgtgctggtcgcaaagggttc
gcctatactttcctcactcccgaccaggagcgcagtgctggagatgttgttcgagcattc
aagcagagtggtcaaaaaccaccggaggaactaatgaatatgtggaatgcatacaagatc
agaatggaacatgaaggaaaaaaggtatatggttcttcaggtttccgtggtaaaggattc
atgtttgatgaagtggaagctcagctgaatagtgaaaaacggcgccttcagaaagctgct
cttggtttacaagattcagatgacgaagatggtgatggaagtgttgattgggactcaaag
attgaagatatgttggccacgaaaacaaaaatcaaagatgtatcaaagggtaatgcagca
gaaagtgtatctgaaactgctgaagttagtgctcaagctggacaagcagtcgtaaacgca
gccttagcacttgctcgacagaaggctgcacaattaggactcgtgaaaaacttgacttct
ggtactccgactgttccacaaccaagcgctgttgtgaataccaccacagtcagcgactcc
aatactggtattgcggctgcggttgctgctgtcacgatacctgtgcctccagctcccaca
agccgtacgttggctgaacaagctgccgaacgtttaaatgctaaacttggttacactaaa
caaacaccaggcgctggtgatgaggatggtgctggtgctaacactagttcgggaagtgac
atggttagaagatacgaagaagaattagttatcaatgacttcccacaaaacgtcaggtgg
cgtatcactggtcgcgagatgctcaatcacctcagtgactattgtgatgtcggtgtatct
gtacgcggagtgtatatgccacctgcaaaagctaagcaacatatacccgaaggtacagat
gacagaccactgtatttatgtattgaggctgtcaatgaaagacaagtcgctttggctaaa
aaagaaattatgcgtattattaaagaagaattagttaaattgcaatctggtaattcaata
aatcgcggacgatacaaagttgtttaa
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