Selaginella moellendorffii: SELMODRAFT_155930
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Entry
SELMODRAFT_155930 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_155930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_155930
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_155930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Utp12
WD40_like
WDR54
PALB2_WD40
Nup160
RMC1_N
PROPPIN
Rhamnogal_lyase
Motif
Other DBs
NCBI-GeneID:
9651173
NCBI-ProteinID:
XP_002983597
JGI:
155930
UniProt:
D8SJR8
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MVKSYLRYEECNSFGVVVSAESNLCYDSTGKLLIAGALDKLLVWNVKQGLCVHSLAPSLP
ESGSRPAVTAIACTPASSSLVASGYSDGSLRIWDIVKGACESTMNSHRGAVTALRYNKNG
SLLATGSKDTDVIVWDTVGETGLFRLQGHRDQVTDVVFIENGNKLLTSSKDTFVRVWDIQ
TQACVQTIVSHRSEVWSLDVDPLERYVVTGGADMELRLFQVSSEPSSDPGKWEVLQLLGD
VKKQSHDRVVTLRFNELGTLLGCQCAGKSLEVYSLHDDKEALKKAKRRKRRKREKADKTE
KPENVAVTEPEDGNEFQASDYIRLLQIVRLKHKARSFAISPLHSRKEVMCTLAVSLHNNS
LEVHEVQAESSAKVHSIDLPGHRSDVRSAVLTMDGTLLLTTSHNAVKIWNPTTGSCLRTM
EAGYGLCGLFGPGNHHAIVGTKTGALEIFDVRSGERVRAVEAHSGAVWSVSALPNGEGFV
TGSADNDVKFWRFDLVQADDKAFKQLTIENVRTLRMAEDVLAVRVSPDGKYLAVALLDST
VKIFFTDSLKFYLSLYGHKLPVLCIDISSDGALLASGSADKNMKIWGMDFGDCHKSLFAH
HDSVMALKFVPNTHYIFSVGKDRVVNYWDADKFQHLLRLEGHHAEIWCLAVSFYGDFIIT
GSHDRSIRRWERTEEPFFIEEEREKQLEARFDSELDDSRAPRQEAPEEGASGLAGRKTQD
TVSAADSIIDALDLAEEERKKILEHKEAGEKTKFQPNVMMLGLSPAAYVLRAVTSVRPSD
LEQAFLMLPFSDALKLLEYVKQWIPDGSQVEIVGRVATMLLRIHHEQLIATPSARAIVTS
VQEIHGSVRSFKNVLGRNIAAMSYVQDLLALSTNALFKDAGAKLSEIRKKLSSFPEKQEG
HNKNKKRQKLQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcctacctccgctacgaggaatgcaattctttcggtgtggttgtgtcggcg
gaatcgaatctgtgctacgatagcacagggaagctcctcatcgccggcgctctcgacaag
ctcctcgtctggaacgtcaagcagggactctgcgtgcattctctcgcgccctctctcccc
gaatcaggctccaggcccgccgtcactgctatcgcatgtacgcctgcctcttcctcactg
gttgcgagtggctactccgatgggtcacttagaatctgggacatcgtcaagggagcgtgt
gaatcaaccatgaacagccaccgaggagcagtgactgccttgagatacaataaaaatggc
tccttgcttgccactggaagcaaagacactgacgttattgtgtgggatacggtaggcgag
actgggttgtttcgtcttcaaggtcacagagaccaggtgactgatgttgttttcattgag
aatgggaacaagcttctcacctcgtccaaggatactttcgttcgtgtgtgggacatacaa
acgcaagcttgcgtccagacgatcgtgagccaccgcagtgaagtctggtcactcgatgtg
gatcctctggagcgctacgtcgtcactggtggtgcggacatggaactcaggctcttccaa
gtatcaagcgagccttccagcgatccgggaaagtgggaggtgctccagcttctgggagac
gtgaagaaacaaagccacgatcgagtagtcactttgagattcaacgagctgggaacgctt
ctcggttgccagtgtgccgggaagtctttggaggtttactccttgcatgacgacaaggaa
gcgttaaagaaggccaagaggaggaaacggagaaagagagagaaggctgacaagactgag
aaaccggaaaacgtagcagtgacagagccggaagatggtaacgagttccaggcatcggac
tatatccggcttctacaaatcgttcgactgaaacacaaggcgagatcgtttgctatctct
cctctacactcgaggaaagaagtgatgtgcacgctggcggtttcactgcacaacaacagc
ttggaagtccacgaagtgcaagcagaatcgtcggccaaagtccactccatcgatctccct
ggtcacaggtcggacgtccgctcggcggtgctcacaatggatggcacgctgctcctgacg
accagccacaatgcagtgaagatctggaatccaacgacaggttcttgcttgcggacaatg
gaggctggctacggtctgtgtggcttgtttggtcctggcaaccatcacgccatcgttggg
accaagacgggagctttggagattttcgacgttcgatcaggggagagagtgagagctgtg
gaagcccactctggagcggtgtggtccgtgtcagctctaccaaatggtgaaggctttgtc
accgggagcgcagataatgacgtgaagttttggaggtttgatcttgttcaagcggacgac
aaggcattcaagcagcttactattgagaatgtgcgtactctaagaatggccgaggatgtt
cttgctgttcgtgtaagtccggatggaaagtatctggctgttgcgcttctcgactccact
gtgaaaatcttttttacagatagcttgaagttttatctctcgctctacgggcacaagctt
cccgtcctttgcatcgatatttcgagcgatggagctctacttgcctccggttctgcggat
aagaatatgaagatctggggaatggactttggagactgccacaagtctctcttcgctcat
cacgacagtgttatggcactgaagtttgttccaaacacccattacattttcagcgttggt
aaagaccgagttgtcaactactgggatgcggacaagttccagcacctgttaagactggag
ggacaccacgccgagatctggtgccttgcagtgagtttctacggagattttattatcacc
ggatcgcatgacagatcgatacgccggtgggagcggacagaagaacctttcttcatagag
gaagaaagagaaaagcaactggaggcacggtttgattccgagctagacgattcgagagcg
cctaggcaagaagctccggaagaaggagcttctggtttggccggacgaaagacgcaggat
accgtgtctgctgcggactctatcatcgacgccttggacttggccgaggaagaaaggaaa
aagattttggagcacaaggaggctggagaaaaaacgaagttccaacccaacgttatgatg
ctcggtctctcacccgctgcctacgtccttcgtgctgttacttcggtccggcctagtgat
ctcgagcaagccttcctgatgctcccattttcggatgcgttgaagctgctggaatacgtc
aagcagtggatacccgatggtagtcaggtggaaattgtaggaagagtagcgacgatgcta
ctacgcatccaccatgaacaactcattgcaacaccatcagcccgtgcaattgtaaccagt
gttcaagaaattcacggcagcgtgcggagctttaaaaacgtccttggacgcaacattgcc
gcaatgagctacgtacaggacttgctagcactgagcacaaatgctcttttcaaagatgct
ggagcgaagctcagcgagataagaaagaagctgtcgagctttccggagaaacaagaaggc
cacaacaaaaacaaaaagcgtcaaaagcttcagtga
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