Selaginella moellendorffii: SELMODRAFT_176522
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Entry
SELMODRAFT_176522 CDS
T01496
Symbol
PGP4E-1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_176522 (PGP4E-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_176522 (PGP4E-1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_176522 (PGP4E-1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_176522 (PGP4E-1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_176522 (PGP4E-1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_176522 (PGP4E-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_176522 (PGP4E-1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_176522 (PGP4E-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_30
AAA_21
AAA_15
APS_kinase
Motif
Other DBs
NCBI-GeneID:
9657550
NCBI-ProteinID:
XP_002977745
JGI:
176522
UniProt:
D8S3C1
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MKGPDATARGGQSEHHDDASKQLVPFYKLFAFADRLDYLLMFLGTVGAIGNGLAMPFMTL
ILGQVTNAFGNNFGDPGKLFDAVSQVAVRFLYLGAGAAVLSFCEVAFWICTGERQATRIR
SLYLQATLRQDVSFFDKETNTGEVIERMSGDTVLIQDAIGEKVGRFLRFVTTFVGGFALA
FIKGWKLTLVMMSTLPLLVAAGATLAILVSKMAGRGQVAYARAGNIVEQVVSGIRTVASF
TGEIKAVEDYNSALKDAYNATIFQGLVSGLGMGFALFTFFNSYALALWYGSRLIINEGYS
GGTVLNIIIVVLLGAMSLGQASPCIGAFAAGRAAAYKMFQVINRTPQIDSFDTSGITPGT
LKGDIEFQDVDFAYPARPEVQIFKKFCLKVPAGTTAALVGESGSGKSTVISLLERFYDPS
GGQILLDGYDVRALQIQWLRRQIGLVSQEPVLFGASIRTNIAYGKDGATNEEILLAAQLS
NASKFINKMPEGFDTQVGEQGTQLSGGQKQRIAIARAIIKNPRVLLLDEATSALDAESEH
VVQEALDRFMVDRTTVVVAHRLSTVKNASLISVVQDGAIIESGTHVELLKNPDGAYSQLI
RLQEVHEESAPAVDPDQVAAPNERALSRSGSKNSSGRWSGRWSFGSRRSRTEDVEAGRDA
DPKDVSIFRVAALNRPELPILIFGSVAAVAHGIIFPAYSLLLSSMLATFFELDKHKVRTE
SNFWALMFVVMAAGSIVVCPSNLFSFSIAGSRLVNRIRQITFSNIIRQEVSWFDTPENSS
GAIGARLSSDAASVRGMVGDSLSLAVQNGSTVVAGLVIAFTADWQLALLVLAMVPVLSIV
GLLQVRLMTGFSADAKTTYQEASRIATSAVSNIRTVASFCAEKKMLELYKQSCKKPLANT
VRIGYISGAGLAISTLVQFGSQALIFWYGARLVRQGKTEFKNVFKVFFAIIFTALSVSQT
LGLAPDLSKVKASVASIFATIDKKSKIDAADPSGRELEDLKGHIDFRHVSFRYPTRSHVP
IFHDLSFSVRAGKTLALVGESGCGKSTVIYLLERFYDPDGGHILVDGVDIRKLQLRWLRQ
QIGLVSQEPILFTGTIRSNISYGKDGTVTDEEVVNAAVASNAHEFITSLPDGYSTQVGER
GIQLSGGQKQRIAIARAIIKQPKILLLDEATSALDAESEHVVQAALDRIMVDRTTIVVAH
RLTTIVNADMIAVVKNGSIVEKGKHSDLVHVEGGAYASLVKLHAAA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcccgacgccacagctagaggcggacagagtgagcaccacgatgatgcctcc
aagcaattggtaccattctacaagctcttcgcatttgccgataggctggactaccttctc
atgtttctgggaaccgtgggagcgattggaaatggtctcgcgatgcccttcatgactctc
atcctgggccaagtcacgaatgcgtttggaaacaattttggcgacccggggaagctcttt
gatgctgtctctcaggtcgccgtgagattcctctatcttggcgctggcgcagcagtttta
tcattttgtgaggttgctttctggatttgcaccggtgaaaggcaagccactcgcatcagg
agtctctatctgcaagcaactttacgtcaagatgtttcgttttttgataaagaaacgaat
accggggaggtgatcgagcgtatgtcgggggacactgttttgatccaagatgccattgga
gagaaggtaggaaggttcttacggtttgtaacaacgttcgtcggtggatttgctctggcc
tttatcaagggctggaaacttacactcgtgatgatgtcgactttgcctctgctggttgct
gcaggagctacactcgctatacttgtttcgaaaatggctggaaggggtcaggttgcgtac
gctagagccggaaatatagtagaacaagttgtcagtggcatcagaacggttgcatctttc
acaggagagattaaggctgtggaggactacaacagtgccttgaaagatgcatataatgcc
accatttttcagggtctagtctctggattggggatgggatttgctctgttcacgttcttc
aacagctatgctctggcgttatggtatggctcaaggctaattatcaatgaggggtatagc
gggggtacagttctgaatataatcattgtcgttcttctaggagcaatgtctttgggtcag
gcttcaccttgtatcggggcgtttgccgccggtcgagctgctgcatataaaatgtttcag
gttatcaaccggacaccacagattgactctttcgatacgagtgggattacgcccggaaca
ctcaaaggagatatcgagtttcaagacgtagattttgcttatccagccagaccagaggtt
cagatattcaaaaagttttgccttaaggtacctgctggaacaacggctgctttggtgggg
gaaagtggaagtggaaagtctactgttataagcttgctggagaggttttatgatccaagc
ggaggtcaaattcttctcgatggttacgacgtgagagcgctacaaattcagtggctgaga
cgtcagattgggcttgtgagccaggagcctgttctattcggtgcatctataagaacaaat
atcgcttatggaaaagatggtgcaacgaacgaagagatattacttgcggcccagctctct
aatgcttcgaaattcatcaacaagatgccagaaggattcgacacacaagttggagagcag
gggacgcagttatctggaggacagaaacagcgaatcgctattgctagagctattataaag
aatcctcgtgttttactacttgatgaagcaacgagcgccttggatgctgaatccgaacac
gtagttcaagaagctcttgaccggttcatggtcgaccgcacaacagttgtagttgctcat
cgtctctctacggtaaagaatgcgtctctcatatctgtggtacaagatggagccattatc
gagtcaggtacacatgttgagctgcttaaaaatcccgacggtgcatactctcaacttatc
cgacttcaagaagtgcacgaagaaagtgctccagcagtcgatcccgatcaggtagcagct
ccaaatgaacgggctctgagtagaagcggcagcaaaaattcttcgggacggtggtcggga
cgatggtcttttggcagtagaaggagccgcaccgaggacgttgaagcgggcagggacgcg
gaccccaaggatgtctctatatttcgagttgcagctctaaacaggccagaacttccgata
cttattttcggatcagtggccgcagtcgctcacggaataatttttccagcctacagtctg
ttactatcgagtatgctggccacgttcttcgagctcgacaaacacaaagtccgaaccgag
tcaaacttctgggcgctgatgttcgtcgtgatggctgctggcagcatcgtcgtttgtcct
tctaacttgttctcattttcaatagcgggtagcaggctggttaatcgtatcaggcaaata
actttttcgaatatcatccgacaggaagtctcgtggtttgatacaccggagaactcaagc
ggtgccatcggtgcccggctttcgtcggatgctgctagtgttcgaggaatggtaggagac
tctttgtccttggccgtgcaaaatggatcaaccgttgttgcggggcttgtaattgcattc
actgcagactggcagctagctcttctcgtcctggcaatggtgcctgttctgagcattgtc
ggccttctccaagtcaggttgatgacgggctttagcgctgacgccaagaccacgtaccaa
gaagcgagccgaattgcaacgagcgcagtgagcaacattcgcaccgttgcatcgttttgt
gcggagaagaagatgctggaactgtacaagcaatcgtgcaagaagcctctggccaatact
gttcgcattggatatatcagtggtgctggtcttgccatctccactctcgtgcagttcggt
tcgcaagctctcatcttctggtatggtgcccgcctcgtccgccagggaaagacagaattt
aagaacgtttttaaggtgttctttgctatcatcttcactgctcttagtgtctcccagaca
ctgggactagctccagatctttcaaaggtgaaagcttccgtcgcttcgatcttcgctacc
atcgataagaagtccaagatcgacgcagcagacccttcaggaagagagttagaagatctc
aagggccatattgactttcggcacgttagcttccggtatcctaccaggtctcacgtaccg
attttccacgacctgagcttctccgttcgagcagggaagacattggctctagtcggagaa
agtggctgtgggaaatcaacagtgatttatctcctagagcgattctacgatcccgatgga
ggccacatcttggtagacggcgtcgacatccgaaagctccagctccgatggcttcgccaa
caaatcggtcttgtcagccaagagccgattctcttcaccggaaccatccgctcaaacatc
tcgtatggaaaggacggcactgtgactgacgaggaggtagtgaacgctgcggtggcctcc
aacgctcacgagttcatcacgagcctcccagacggctacagcacacaggttggcgagcga
ggaatccaactctcgggtggacagaagcagcggatcgccatcgccagggctatcatcaag
cagcccaagatcttgctgctggacgaagccaccagcgctctcgatgccgagtcggagcac
gtcgtccaggcggcgctcgaccggatcatggtggacagaacaaccatcgtcgtcgcgcac
aggctcacgacgatcgtcaatgcggacatgatcgcggtggtgaagaatggatcgatcgtc
gagaaagggaagcactcggacttggtgcacgtcgagggaggagcttacgcctcgctcgtc
aagctccatgccgcggcttag
DBGET
integrated database retrieval system
