Selaginella moellendorffii: SELMODRAFT_184079
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Entry
SELMODRAFT_184079 CDS
T01496
Symbol
PGP4B-2
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_184079 (PGP4B-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_184079 (PGP4B-2)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_184079 (PGP4B-2)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_184079 (PGP4B-2)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_184079 (PGP4B-2)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_184079 (PGP4B-2)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_184079 (PGP4B-2)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_184079 (PGP4B-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_29
AAA_16
AAA_15
RsgA_GTPase
AAA_21
AAA_30
DUF87
DLIC
APS_kinase
AAA_24
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
9639274
NCBI-ProteinID:
XP_002988703
JGI:
184079
UniProt:
D8SZH1
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MVEKDVPGSNAAVQDDQSATQVVPIFKLFSFADWMDVLLMVLGTAGAVANGMTMPLMAIV
FGELTDSFGQNVSDVDRLSREVSKVSLRFVYLGIVASIGSLFQLACWMCTGERQAARIRN
LYLKAILRQDISFFDKETKTGEVIGRMSGDTILIQDAMGEKVSKLIQFTTAFFAGFVIAF
IKGWKLTLVMMSVMPLLVFAGGMMANLMSKMASRGQKAYAEAAVVVEQVTGGIRTVASFT
GERKSMADYETALTKAYKAGVFEGVASGAGLGFTLFTMFSSYGLALWYGSKLVLNGGYSG
GDVISVLFAVLTGGMSLGQTSPSITAIASGRAAAYKMFEVIRRVPLIDAFDMSGQTLESV
KGDIELRDVTFSYPTRPDVPVFTSFNLEIPSGTTVALVGESGSGKSTVISLIERFYDPQA
GEVLIDGVDIRKLQPKWLRQQIGLVSQEPVLFATSIRENIAYGREGATEEEIMEAARLAN
AAKFISKMPKGFDTQVGEHGTQLSGGQKQRVAIARAILKNPRILLLDEATSALDAESERV
VQEALDRIMVNRTTVIVAHRLSTIKNADCIAVVQRGSIVEKGTHSELIQRPDGAYEQLVR
LQEMHDVKSNQSLSAAQAIDPDEVVVIDQELDERRLSRSSSRGSFGSKRNVTRSSFSLTR
TASVDPEQADKSDGKTGVTRNNFLRLAAMNKPETPVFIVGALASTANGVVFPVFGLLLSN
IFGVLYSTNRHKLRHDANFWASMFLVQASACLIISPIQLSAFGFIGQRLIRRVRKRSFES
VVRQEIAWFDDPSNSSGAISSRLSVDAAHVKSMVGDSLSLLLQNLASLIAGLVIAFTANW
ILSLVVLALIPLLGAQGVVQTKMMIGFSKDAKVMYEEATKIANDAVSSIRTVSSYCLEAK
MLELYKTKCSIPTRNGIRNGVVSGIGLGISSFVMFAAYAFSFWFGARLVREGKTSFQNVF
KVFFAITMSAFGIAQGVSLAPDFAKVKSGVNSIFATLDRKSKIDPSNEEGKTLESTRGDI
EFRNVRFRYPARHEAEIFRNLSFSIPAGKTMALVGESGSGKSTVISLLERFYDPDSGSIL
IDGVDIRSLKLRWLRQNIALVSQEPTLFSGSIRSNIAYGRESGAPVSEEEITAAAKAANA
HSFISAMPGGYETEVGERGIQLSGGQKQRIAIARAVLKEPKILLLDEATSALDAESERLV
QEALDRIMVGKTSVVVAHRLSTIVGVDMIAVVKNGGIVEQGSHEELITKPNGAYATLVKL
HRHKPAS
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaaggatgtccctggatcgaacgcagcagtgcaagatgatcagtccgcgact
caagttgtccccattttcaagctcttcagcttcgcggattggatggatgttctcctcatg
gtgctgggaactgccggcgctgtggcaaacggaatgacgatgccgctcatggcgattgtc
ttcggcgagctgacggattcgtttgggcagaacgtgagcgatgtggatcgcctctccagg
gaagtctccaaggtgtcgttaaggtttgtgtatctcgggatcgtggcttctattggatct
ttgtttcaacttgcgtgctggatgtgcaccggagagagacaagccgcgaggattcgaaac
ttgtatctcaaagccattctgcgacaagacatctccttttttgacaaagaaaccaagacg
ggagaagtgatcggtcgaatgtccggagatacaatcctcatacaagatgcaatgggtgaa
aaggtgtcgaagctcatccaattcaccaccgctttctttgctggttttgtaattgccttc
atcaaaggctggaagctcacgctagtgatgatgtccgtgatgcctctgctcgtttttgct
ggagggatgatggccaatctcatgtccaaaatggcgagtcgaggccagaaagcttacgcc
gaggcggcagttgtggtggaacaagtcactggaggcatcagaactgtggcttcgtttact
ggcgagcgtaagtccatggctgactacgagacagcacttacgaaagcgtacaaagctgga
gtttttgaaggagtcgcatcgggagctggccttggtttcacgctgttcaccatgttttcc
agctatggtctagcgctgtggtatggatcaaagctggttttaaacggtggatactcgggt
ggagatgtcatcagtgtcttgtttgctgtgctcaccggaggcatgtctttgggacaaact
tcacccagtattactgcgatagcatccggaagagctgcagcttacaagatgttcgaagtc
attcgtcgagtccctctgattgatgcctttgacatgagcggacaaacactagagagtgtg
aagggcgatatcgagcttcgggacgtcaccttttcgtatcccacacgtccagatgtcccg
gtgtttacgagcttcaatctggaaatcccgtctgggacaacagttgctttggtcggggag
agtggcagcggcaagtcgacggtgataagcttgatcgagaggttttatgatcctcaggct
ggcgaggttttgatcgatggtgtcgacatccggaagctccagccgaagtggctacgccaa
cagatcggacttgtcagccaggaaccggttttgtttgcaacctccatcagagagaacatt
gcttatggcagagagggagcgactgaggaggagattatggaagctgctcgccttgcgaac
gctgcgaagtttatcagcaagatgccaaagggattcgacacacaagttggagagcacggg
actcagctttctggcggacagaagcaaagggtggccatcgctagagctatactaaaaaat
cctcgcattcttctgctggacgaggcaaccagcgctttggatgccgagtcggagcgagtg
gtgcaggaagcgttggaccggatcatggtgaacaggacaacagtgatcgtcgctcacagg
ctttccacgatcaaaaacgcagactgcatcgctgttgttcaaagaggaagcattgtggag
aaagggacacactcggaacttattcagaggccagatggagcttacgaacaactagttcgt
ctccaagaaatgcacgacgtgaagtcaaaccagagcttgagcgctgctcaagcaatcgat
ccagacgaggtggtagtaatcgatcaagagctggatgaacgaaggctgagcaggagtagc
agccgtggatcgtttggaagcaaacgcaacgtaactcgaagttcgttctccttgactaga
acggcgagtgtcgatccagagcaggccgacaagagcgacggaaaaacaggagtaacccgg
aacaactttcttcgcctcgcagctatgaacaagccagaaacaccggttttcatcgttgga
gctcttgcttccactgcaaacggtgtggtgtttccggtcttcggcctgcttctgtccaac
attttcggagttttgtacagcacgaaccggcacaagctgagacacgacgccaacttctgg
gcgagcatgttcctggtacaagcttccgcgtgcttgatcatctctcccatacaactcagc
gccttcggattcatcggccagagactcattcgacgagtccggaagagatcgttcgagtcc
gttgttcgtcaggagattgcctggtttgacgatccgtccaattcaagtggagcaatcagt
tcccggctctcagtagatgctgctcatgtcaagagcatggttggcgattccttgtcgctg
ctgctgcaaaatctggcgtcactcattgcagggctcgtcatcgcgttcactgcaaactgg
atattgtcacttgttgtcttggcacttattccactactcggagctcaaggcgtagtccag
accaagatgatgatcggtttcagcaaagatgcgaaggtcatgtatgaagaggcgacaaaa
atcgcaaacgatgcagtgagcagcattcgtactgtgagctcttactgcctcgaagctaaa
atgctggagctttacaaaacaaagtgctccatcccaaccaggaacgggattcgcaacgga
gttgtgagtggaatcggtctcggcatttcgagcttcgttatgttcgcagcctatgccttc
agcttttggtttggagctcgtcttgtcagggagggcaaaacaagcttccaaaacgtgttt
aaggtgttctttgcgatcacgatgagcgcattcggcatagctcagggagtgtcgctcgcc
cccgactttgcaaaggtgaaatcgggagtgaactcgatcttcgcgactctggacaggaaa
tcaaagatcgatccttccaacgaggaaggcaagacgctggaatcgactcgcggagacatc
gagttccggaacgtgagattccgctatccagcgcggcacgaggcggagatcttccgaaac
ttgagcttttccatccccgcgggcaagaccatggcgctggtcggcgagagtggaagcggc
aaatccacagtcatctcgctactggagaggttctacgacccagattcgggcagcattctc
atcgatggcgtcgacattcgatcgctcaagctacgctggctccgacaaaacatcgccctg
gtcagccaagagcccacactgtttagcggcagcatccggtccaacatcgcgtatgggaga
gagagcggcgcgcccgtgagcgaggaagagatcaccgcggccgccaaggccgccaacgcg
cacagcttcatctccgcgatgccgggaggatacgagaccgaggtcggggagaggggaatc
cagctctcgggcgggcagaagcagcggatcgcgatcgcgagggcggtgctcaaggagccc
aagatcttgctcctggacgaggcaacgagcgcgctggatgcagagtcggagaggctggtc
caggaagcgctggatcggatcatggtgggcaagacgagcgtggttgtggcgcatcgattg
tccacgattgtgggcgtggacatgattgcggtggtgaagaatggagggattgtggaacag
ggcagccacgaggagctcatcacaaagcccaatggcgcctacgctacgctggtcaagctc
catcgccacaagccagcaagctag
DBGET
integrated database retrieval system
