Selaginella moellendorffii: SELMODRAFT_186743
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Entry
SELMODRAFT_186743 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
smo
Selaginella moellendorffii
Pathway
smo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_186743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_186743
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
SELMODRAFT_186743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
PI3K_p85B
DDR
IL4
Motif
Other DBs
NCBI-GeneID:
9662154
NCBI-ProteinID:
XP_002992496
JGI:
186743
UniProt:
D8TA36
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MAGRLSDLILAATNSPGKELEEPLLKAIKALVRASDDNVKAAADLLMDRLGKNHSQVRLL
ALLLIDQLFTRSKLFRGQIVAVLEKFMVLCLGHRTDQPLPAPADRAALLKAKALEIVERW
NETFGPHYKELQLGYEYLKFTLRLDFPGVREAANRAEEEKNARDRRTQDLLRCRLLQLTE
NFPGLRRDLESTMSQLEECFAILSEEEEVVQDEDGFLEVDKDEEDSNEVFGIQSLRSMRD
QEELMVTESRDNGAIFDMARDLLKLVTTRHLPAAQEWLSVLMRVDPEDRQSRDALMKEVI
DLRNRLVVLKDKCQELGIVEVAKSKTTTDDDVEWEEEEIFDRSKLDGPRHKLEQERERER
EREQGGEIKKSSSPQATATGTASSSNATMSELKQKLFEEAPVLPWGSFLDAWGSDAAVPA
NNRGLVLDNHWGRVDPDALISTEKMAEMQVRASYYQPLKSELRPCSAPLRNGGLCQRRDL
RKCPLHGTIIPRDDRGNPLEEKRAVEAKGKEKAAVSPAALAAQAVRNVRGRDEAKRKQNK
RLRQSQARTDRQHNEAVLRTAALAHDTQTIEAGLERKSLDEETPKKRKGGLSAMLRKKET
PKDRIARRLLRGRAVDAMVGSIARDEDAKYRESFPNQW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgattgagcgatctcatcctcgcggccacgaattccccgggcaaggagctg
gaggagccgctgctcaaggcgatcaaggcgctggtgcgcgcctcagatgacaatgtcaag
gcggcggcagaccttctcatggaccggctagggaagaatcactcccaggtcaggcttctc
gctctgctgctcatcgatcagctctttacgcgatcgaagctgtttcgcggccagatcgtg
gcggtgctcgagaaatttatggttctctgcctagggcaccgcaccgaccagccgctccca
gctcccgcggatcgagcggcgctgctcaaggctaaggcgctggaaatcgtggagagatgg
aacgagacgtttgggcctcactacaaggagctccagcttggctacgaatacttgaagttc
acgctacgtctcgactttccgggtgttcgagaggccgcgaatcgagccgaggaagaaaag
aatgccagggacaggcgcacgcaagatcttctccggtgccggctgctccaactcacggag
aatttccctggcttgaggagagatctcgagtcgacgatgagtcagctggaagaatgcttt
gccatcttgagcgaggaggaggaggtggtccaggacgaggatggatttttggaggtggac
aaagatgaagaggacagtaatgaggtgtttgggatccaaagcttgcggtccatgcgtgat
caagaggaattgatggtcacggaatctcgcgacaacggggccattttcgacatggcccgg
gatttgctcaagttggtgacaacaagacatcttccagcagcgcaggaatggctgtcggtt
ttgatgcgagtcgacccggaagatcgacaaagccgggatgctctcatgaaggaggtgatc
gacttgaggaaccgcctggtggtcttaaaggataagtgtcaggagctcgggattgtcgag
gtggccaaatccaaaaccaccactgacgacgatgtggaatgggaagaagaagagatattt
gacaggagcaagctggatggtccacgacacaaactagagcaagaacgagaacgagaacga
gaacgggaacaaggtggcgaaataaaaaagagttcctcacctcaggctacagcaacagga
acggcttcgtcatctaacgcaaccatgtccgagcttaagcagaagctgtttgaggaggct
cccgtgctgccgtggggatcgtttctcgacgcctggggctccgacgctgcggttcctgca
aacaacaggggactggttctcgacaaccactggggaagagtggatccggacgctctcatc
tctaccgagaagatggcggagatgcaagtgagagcatcgtactaccagcctttaaagtcg
gagttacgtccttgctcggcaccgctgaggaatggaggcctttgccagagacgagatctc
cgaaagtgcccgcttcatggcacaataattccgcgggacgatagaggcaatcctctcgag
gagaaaagggctgtcgaagccaaggggaaggagaaggcggcggtcagtccggcagctttg
gctgctcaagccgtaaggaacgtgagaggcagggatgaagccaaaaggaaacagaataaa
cgtttgcgacagtctcaagccaggacagacagacaacacaacgaggccgtgctgagaact
gccgcgcttgctcacgacacgcagacgattgaagcaggcctagagaggaaaagcctggat
gaagaaacgccaaagaaacgaaaaggtggtctcagcgctatgctccgtaagaaggagact
ccaaaagacagaattgccaggagactgctgcgcggccgggcagtggacgctatggtcggc
agcatagctcgagacgaggatgccaagtacagggagtctttcccaaatcagtggtga
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