Selaginella moellendorffii: SELMODRAFT_235518
Help
Entry
SELMODRAFT_235518 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_235518
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_235518
04147 Exosome [BR:
smo04147
]
SELMODRAFT_235518
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_235518
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_235518
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_235518
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_235518
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_235518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
AAA_15
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
9636860
NCBI-ProteinID:
XP_002988424
JGI:
235518
UniProt:
D8SYG2
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MGPERSVSYISLFRFADAKDFVLIAAGTLGAVVNGLTFPAMLIIRGHMIDNFGTLPQDGA
MSTKISQDALLFVYIAIVAWIASYIEVSCWMFTGERQASRLRALYLRSVLRQNVSFLDNE
LSATYIVNCVSDDTLLVQEAISEKTGNFIRNVVQFVGGYLVGFTQSWKLAIAILPFTPLL
ILPGVFYGSAILKFENEKQATYSKAGNIAEQTIACIRTVYSLVAETKSLRAYSLALEKTV
ASGLKQGLVKGLVLGSNGISFVLWAFMAWFGSVLVMHGEANGAEIITTGLALLNGGRALG
FAMSNLGVFVEGRMAAWRMFHIIRRIPPIDVDKSDGKTMQSVQGHIRLEEVVYGYQTRAD
TPVLTSFTLDIPAGKTTALVGRSGSVKIYCYFSAGTVLRSFSWSLTSIGIGTRLVLENIL
YGKEDASDDEVYRAAHAANAHSFIVRLLEGYDTLVGEQGLKMSGGEKQRIALARAIIKEP
RILLLDEPTSALDMKSETAVLAALEKARLGRTTLIVAHRISTIRNADAVAVLESGRIVET
GRHEELMAVGKAYRALVSLETPHTPVTAAQNDQDSVLYRSRRIRQWSFQLLSLATPEWKQ
GVLGLAGALGFGVVHPMYAFLLGCMVSVYYLNDHEEMRKRINLYCVIFPAMMAASFLVNL
EQHCNLAAVGEHLSKRLREAMLAAILKFDVGWFDRDENSSSAVCTRLSYDANVIRALITD
RISLLVQTGSAVIVSFTIGLVLNWRLGILMIGTQPLFVFCYYIKLVCLKGFTHKSAKAHT
EASQLACEAISQHRTITAFCSQGRVLAMLQSRLDASVTDLKKRSHTAGLGLGVAHFVLYA
SWGLQFWYAGVLVSKRKISYQDVFKIFFVFLSTGRVVAEALGLTPDLAKGAASIDSVFGI
LCQEGKINANDPEATPPGKVAGEIDACNVFFAYPTRPDVVVLRGLNLHVPGGTSMALVGH
SGSGKSTVVALIERFYDPLSGVVKIDGKDIKELELYSLRRQIGLVSQEPCLFSATIHENI
AYGRESECTEAEVIQASRIANAHNFISTLPEGYKTHSGRKGIRLSGGQKQRIAIARAVLK
SPQILLLDEATSALDLESEHLVQDALKTMAGRTTLVIAHRLSTVRNCDCISVMHSGAVVE
QGTHEELMSMSGTYFSLVRLQEAGCSGTKCS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggggccggagcggtcggtgtcctacatttcgctgttccggttcgcggatgccaaagat
tttgtgctgattgcggctggcacgctcggcgccgtcgtcaatggcctcactttccctgcg
atgctcatcattcgcggccacatgatcgacaactttggtactttgccacaggacggcgcg
atgagcacgaagatctcccaggacgctcttctttttgtttatatcgccattgttgcgtgg
atcgcatcatacattgaagtaagctgctggatgtttactggcgagaggcaagcgtcgagg
ctgagagcactgtatctcagatctgtgctccgccagaacgtttcttttcttgacaacgag
ctttcagcaacttacattgtcaactgcgtatcggacgatacgctcctggtgcaagaggca
attagcgagaagactggcaacttcatccggaacgttgtccagtttgtgggaggatatttg
gttggatttacgcagtcttggaagctggcaatcgctatactgcctttcacgccgctgctc
attctgccaggggtgttttacgggagcgccatcttgaagtttgagaatgagaagcaggcc
acgtacagtaaagcagggaacatcgcggagcaaacgatcgcgtgcattcgtactgtgtac
tcacttgtcgcggagaccaagtcccttcgagcttattctcttgcactcgagaaaaccgtt
gcatctggtttaaagcagggacttgtcaaggggctggtactcggttccaacggtatcagc
ttcgttttatgggccttcatggcttggtttggaagtgtgcttgtcatgcacggcgaagct
aatggtgctgagattatcactaccggtttggctctgcttaacggaggaagagctcttggt
tttgccatgtccaatcttggcgtttttgttgaaggacgcatggcggcgtggagaatgttt
cacatcattaggcggattccacctatcgacgtcgataaatctgacgggaaaacaatgcaa
tctgttcaagggcacatcaggctggaggaagtggtatacggctatcagacgagagctgac
acacccgttcttaccagtttcacactggacatacccgctggtaaaaccaccgctttagtt
ggcagaagtggctccgtgaaaatctactgttatttctctgctggaacggttttacgatcc
ttcagctggagcttgacctcaattggtatcggcaccagattggtcttggaaaacatatta
tacggaaaggaagatgccagcgatgacgaggtctacagagctgctcacgcagcaaatgca
catagttttattgttaggcttctcgaaggctacgacactctggttggcgaacaaggacta
aaaatgtccggaggtgaaaagcaaagaattgccttagccagggcgataataaaggaacca
cgtatccttctgctggatgagcctaccagtgctttagacatgaagtcagaaacagcagtt
ctggctgctttagagaaggcaaggcttggacgcacgacgcttatagtcgcgcacaggatt
tctacgatccggaacgcagatgcagttgctgttttagagtcgggaaggatagtagagact
ggaagacacgaagagttaatggcagtggggaaggcgtacagggctcttgtttctttggaa
acgcctcacacaccagttaccgcagcccagaatgatcaagattcagttctttatcgctca
aggcggatcaggcaatggtccttccagcttttgagtttagcaacaccggaatggaagcag
ggagtgttgggactcgccggtgctcttggttttggcgttgtgcatccaatgtacgccttt
ttgctgggatgcatggtttccgtatactacctgaacgatcacgaagagatgcggaaacgg
atcaacctctactgcgtcatctttcctgcgatgatggctgcgtcctttctcgtgaacctc
gagcagcactgtaacctggcagctgttggcgagcatttgtcaaagaggctgcgtgaggcg
atgctggcggcgatcctgaagttcgacgttggatggttcgacagggatgaaaacagcagc
agtgcagtttgtacacgcttgtcctacgacgcaaacgtgattcgagctcttatcaccgac
cgtatctcactcctcgttcagacgggtagcgcagtaattgtgagtttcaccatcggactg
gttcttaactggaggctgggaatactcatgatcgggactcaacctctgttcgtcttctgc
tactacatcaaactggtatgtctgaaaggctttacgcacaagtctgcaaaggcacacacc
gaggcaagccagttagcttgcgaagcgataagtcagcacaggacaatcacagctttttgt
tctcaaggcagagttctggcaatgctccaatccaggctagatgcgtcggttacagatctg
aagaagcggtctcatactgctggattgggcctgggagtggcacacttcgttttgtacgca
tcatggggccttcagttctggtatgcgggcgtgcttgtcagcaagagaaagatcagctat
caggacgtcttcaagatatttttcgtgttcctgagcacgggacgtgtggtggcagaggca
cttggcctgacgcccgacctcgccaaaggtgctgccagcattgattcggtatttgggatc
ctttgtcaggagggaaagataaatgcgaacgatccagaagctactcctccggggaaagtt
gcgggagagatcgacgcatgcaacgtgttcttcgcttatccaacaaggccggacgttgta
gttctgagaggcttgaatctacacgttccaggtggtacttctatggcactggttggtcac
agtggctcggggaaatccacagtcgtcgcgctcatcgagaggttctacgaccctctaagc
ggcgtggtgaaaatcgatgggaaggacatcaaagagcttgaactttactcgctgaggaga
cagatcggtctggtgagccaggagccatgcttgttttcggcaaccatacatgaaaacatc
gcttatggacgtgaaagcgaatgcaccgaagcggaagtaatccaagccagtcgcattgct
aatgcacacaatttcatcagtacactccctgaggggtataagacacattctggccggaag
ggaatccgtctctctggcggtcagaagcagcgaattgcaatagctcgagcggtcttgaag
agcccacagattttactgctggacgaagccaccagtgctttggatctagagtcggagcac
ctcgttcaggatgcgctgaagacaatggccggaagaacgacgctcgtgatcgctcacagg
ctctctacggtgaggaactgcgattgcatctcggtaatgcacagtggagctgtggttgag
cagggaacacatgaggaactaatgtcgatgtctggtacgtatttttctctagttcgtttg
caagaagctggctgcagtggcacaaagtgctcctaa
DBGET
integrated database retrieval system
