Selaginella moellendorffii: SELMODRAFT_441789
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Entry
SELMODRAFT_441789 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00511
Other glycan degradation
smo00513
Various types of N-glycan biosynthesis
smo00520
Amino sugar and nucleotide sugar metabolism
smo00531
Glycosaminoglycan degradation
smo00600
Sphingolipid metabolism
smo00603
Glycosphingolipid biosynthesis - globo and isoglobo series
smo00604
Glycosphingolipid biosynthesis - ganglio series
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
SELMODRAFT_441789
09103 Lipid metabolism
00600 Sphingolipid metabolism
SELMODRAFT_441789
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
SELMODRAFT_441789
00531 Glycosaminoglycan degradation
SELMODRAFT_441789
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
SELMODRAFT_441789
00604 Glycosphingolipid biosynthesis - ganglio series
SELMODRAFT_441789
00511 Other glycan degradation
SELMODRAFT_441789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smo03110
]
SELMODRAFT_441789
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
SELMODRAFT_441789
Chaperones and folding catalysts [BR:
smo03110
]
Intramolecular chaperones
Others
SELMODRAFT_441789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
9650606
NCBI-ProteinID:
XP_002972464
JGI:
441789
UniProt:
D8RMK5
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MEMRRLFGFLIFWSVQVCRGSDLFLWPQPQIVEAIDRSCHLISPTFTISVPAGSPKLLRA
AASRYKRQVCTEKWSAVSIQARISSQSAQATISRLVISVSDLRAGLQNGVDESYTLVVSE
GDSASIVSNTTWGALHGLETFSQLVQFDSQARKLFISYGVRITDWPLYSHRGLLLDTSRN
FFPVKDILRTIQALSYNKLNVFHWHISDSHSFPLLLESEPELSKKGSYGPEFTYSRQDVK
RIVAFARSRGVRVIPEIDAPGHTASWGAAYPEMLTCLGKMWWDPNTQDWSKRMASEPGAG
QLNPLHPKTYQVLKHIIEEVTALFPDSFYHAGADEIAPGCWNASEELSRLVSSGNATMGS
LLELFVNRTYPMIASRNKTVVYWEDILLDAAVNVSADLLPRGSTVIQTWNNGAINTKAVT
SAGYRAVVSSSDFLYLDCGRGDFLLNDSRFDQPNRTVVPPSLSITGDDASFNYGGSGGSW
CAPYKTWQRIYDFDLAYGLTRQEAALVIGAEAALWSELADANVLDGLVWPRTSALAEVTW
SGNRDSSSKKRTTEAGKRLVEWRERMVSRGVAAHPMMPRWCILNHGLCNINI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagatgagaagactgttcggctttctcatcttctggtccgtgcaggtttgcaggggc
tccgatttgtttctgtggccgcagcctcagattgttgaggccatcgacaggtcatgccat
ttgatttcaccaacattcacgatctcggtgcctgcgggttctccaaagctgttgcgagct
gctgcatcgaggtacaagcgtcaagtttgtactgagaaatggtctgcagtgtccattcaa
gctcgcatttcttctcagtccgcacaagcaactatttcacggctcgtcatctccgtgtcg
gacttacgagccggcttacagaatggtgtggacgaatcctacacactggtggtttcagag
ggtgactctgcctcgattgtgtcgaacacaacgtggggggctctccacgggctggaaaca
ttctctcaactggtgcagtttgactcgcaagctcgcaagctcttcataagctacggggtc
cgaatcacagactggccgctctactctcacaggggactcctgctggacacatccaggaac
ttctttccggtcaaggacatacttcggaccatccaggctctcagttacaacaagctcaac
gtcttccactggcacatatcggactcgcattcgttccctctactcctggagtcggagccg
gagctgtccaaaaaaggctcgtatgggccggagtttacgtactcacgtcaggacgtgaag
cgcattgtggccttcgccaggtctcgcggtgtcagagttatccccgagatcgacgctcca
ggacacacagcatcatggggagcggcgtacccagagatgttaacatgcctgggaaagatg
tggtgggatcccaacactcaagactggagcaaacgcatggcgtcggagccaggtgccggg
cagctcaatcccctacacccaaaaacttaccaggttctcaagcacatcatcgaggaggtg
acggccctcttcccggactccttctaccacgcaggggccgacgagatagcccccggctgc
tggaacgcgagcgaggagctctcacgcctcgtctcctccgggaacgccaccatgggcagc
ctcctggagctcttcgtcaacaggacgtacccgatgatcgcgtcgcgcaacaagacggtg
gtgtactgggaggatattctgctcgacgccgcggtcaacgtgtctgctgacctcctcccc
agggggtcaacggtcatacagacgtggaacaacggggccatcaacaccaaggcggtgacg
tcggcggggtaccgcgcggtggtgtcgtcgtccgacttcctctacctcgactgtggtcgc
ggcgacttcctgctcaacgactcgcgattcgaccagcccaaccggacggtggtgccgccg
tcgctgagcatcaccggtgacgacgcgtccttcaactacggtggtagcggcgggtcgtgg
tgcgcgccgtacaagacgtggcagcggatctatgactttgacttggcgtacgggctgacg
cggcaggaggcggcgcttgtgattggcgctgaggccgccctgtggtctgagttggccgat
gcgaacgtgctggatgggctggtgtggccgcggacttccgcgctggcagaggtgacgtgg
tcagggaatagagactccagctccaagaagcggacgactgaggcaggaaagcggctggtg
gagtggcgggagagaatggtgtcacggggagtggcagctcacccgatgatgccacgctgg
tgtatcttaaatcatgggttgtgtaacattaacatatga
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