Selaginella moellendorffii: SELMODRAFT_77392
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Entry
SELMODRAFT_77392 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00280
Valine, leucine and isoleucine degradation
smo01100
Metabolic pathways
Module
smo_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SELMODRAFT_77392
Enzymes [BR:
smo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
SELMODRAFT_77392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
MCCA_BT
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
GARS_A
ATPgrasp_ST
HlyD_D23
ATP-grasp_3
GCV_H
ATP-grasp_4
Motif
Other DBs
NCBI-GeneID:
9657883
NCBI-ProteinID:
XP_002961577
JGI:
77392
UniProt:
D8QRV7
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MGNSASIARRSKRSSSSLANPFSQVPPVEKSPAQRPIEKILIANRGEIACRIIKTARSLG
LKTVAVYSDADRNSLHVRRADEAVFIGPASAQLSYLSTTSILDAARRTGADAIHPGYGFL
SENSKFAQACHESGITFIGPSAAAISLMGDKSASKKLMSGANVPVVPGYHGDDQSHELLQ
SEADRIGYPVLIKPVLGGGGKGMRIVHSRDEFLDSLRSALRESAAAFGDTRVLIEKYIAQ
PRHIEVQIFGDRFGNVVHLFERDCSVQRRHQKIIEEAPAPLMSDDFRNSIGQAAVNAAKV
SSFVICCCCELPVEFIVDTATGDFFFMEMNTRLQVEHPVTEMVTRQDLVEWQIRVANGES
LPLEQKTGHAFEARVYAENVPRGFLPAAGVLYHYNPPPASSTVRIETGVEQSDAVSVHYD
PMIAKLVVWGSDRDMALAKLHNCLSNFQASWFALIFYNYCSVAGLPTNIHFLKKLAKHPA
FRAGDVETHFIEHHKNELLDFSERAKRDVKSFAALAAVGVCVRETFMISSAESRTGGPWH
TTSGFRVNNPYTRKISLDWMPESESLSCKPMSLDVTYSSDNEFLVKFAEDSSCVKLTAKR
VASSGCDITVDINGISSTINYGYYLQKSAYHIHVWKDGEHHHFTTALREAYDTESHGETS
QRLTSSGGSSKLTPGAVASPMAGLAVKVLAELGSNVKAGDPLLVLEAMKMEHTVKAHISG
VINQVNITAGQQVSDGGILFHIKAQES
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggaaattccgcatccattgcgaggaggagcaagcgatcttcgagctcgctcgccaat
cccttctctcaagtgcctcccgtggagaaatctccagcccagcggccgatcgagaagatc
ctgatcgcgaacaggggcgagattgcgtgccggatcatcaagaccgcgcgtagcttggga
ttaaaaacggtggcggtttacagtgatgccgatcgaaactctctacacgtccgtcgagcc
gatgaagcagtgtttatcggccccgcctctgctcagctcagttacttgtccactacttcc
atcctcgacgctgctcgtcgcactggagccgatgcaatccatcccgggtatggatttcta
tcagaaaattcgaagtttgcgcaggcttgccacgagtctgggatcacattcattggccct
tcggcagctgcgattagcttgatgggagacaaaagtgcctccaaaaagcttatgagcggt
gctaatgttcctgttgttcctggataccacggggatgatcagagccacgagctgctgcaa
tctgaggctgatcggattggctatcccgttctgatcaagcctgttcttggtggcggagga
aagggcatgaggattgtccacagcagagacgagtttctggacagtttgagaagcgctcta
cgtgagtctgctgctgcgtttggcgacaccagggtcttgattgagaagtatatcgcacag
cctcgacacatagaagtccagatctttggcgaccgctttggaaacgttgttcatttgttt
gaacgggactgtagcgttcagaggcgccaccagaaaattatagaggaagcaccagcgccg
ctcatgtcagacgactttcgcaactcaataggccaagcagcagtcaatgcggctaaggta
tcctcttttgtgatttgctgctgctgtgaattacctgtcgagtttattgtcgacactgca
acaggagattttttctttatggagatgaacacacgtttgcaagttgagcaccctgtcacc
gaaatggtgacgcgtcaagacttggtggaatggcaaattcgtgtcgcaaatggcgaaagc
cttccacttgagcaaaagacaggtcatgcgtttgaggctcgggtctatgctgaaaacgtt
ccaagaggttttctacctgctgctggagttctttaccattataatccacctcccgcttca
tccactgtgagaattgagacgggtgtagagcaaagtgatgctgtaagcgtccactacgat
cctatgatagccaagctggtcgtatggggtagtgatcgcgatatggcgttggcgaagctt
cataattgcctctcgaattttcaggcaagctggtttgctcttattttttataattattgt
tcagttgctggacttccaactaacatccactttttaaaaaagcttgcaaaacatccggct
ttcagggctggggacgtggaaacacacttcattgaacaccacaagaacgagctactagat
ttttccgaaagagccaagcgagatgtaaaatctttcgctgctttagcggccgtgggcgta
tgtgtaagggagacatttatgatttccagtgcagaatcgagaactggaggcccatggcat
acaacttctggttttcgagtcaacaatccttataccaggaagatctcgttagactggatg
cctgagtccgagagtctctcatgcaaaccgatgagcttagatgtcacttattcaagtgac
aacgagttcttagtaaagtttgcggaagattcatcttgtgtcaaacttacagctaaaaga
gttgctagttctggctgtgacataaccgtcgacatcaatggcatttcctccactataaac
tatggttattatctgcagaaatcggcttatcatattcacgtgtggaaggacggcgagcac
catcactttacaacagcgttgcgggaggcctatgatacagaaagccatggtgaaacatct
caacgattaacaagttctggcggtagtagcaagctaacaccgggagccgtcgcttctccc
atggccggactggctgtgaaagttcttgcagagctgggctcaaatgtgaaagctggagat
cctctcctggttttagaagctatgaagatggagcacactgtaaaagcacatatttctggt
gttatcaatcaagtgaacatcactgccggccagcaagttagcgacggggggattcttttt
catatcaaggctcaagaatcataa
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integrated database retrieval system