Sphingomonas morindae: LHA26_12705
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Entry
LHA26_12705 CDS
T08557
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
smor
Sphingomonas morindae
Pathway
smor00190
Oxidative phosphorylation
smor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LHA26_12705
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHA26_12705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smor03019
]
LHA26_12705
Enzymes [BR:
smor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LHA26_12705
Messenger RNA biogenesis [BR:
smor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LHA26_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
USI72156
LinkDB
All DBs
Position
1:2592119..2594395
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AA seq
758 aa
AA seq
DB search
MSEAEQPQTQSLAEAEARLVAAEALVPATAESIASAAADTQARQKSEAAVEPVAPRQRYF
NRELSWLAFNGRVLDEACNPAHPLLERLRFLSISGNNLDEFFMVRVAGLRGQQINGVEQL
SADGLTPGQQLAAIVESADQLMLRQQDVLNALREELAAHDFHILGQNDVPDEQAEWLEQH
FRDQVLPVLTPQALDPAHPFPFIPNKGFSLVFDLKRLADGEPIRELLMIPPTLPRFIRLP
GERARYIAVEAVIRRFSGLLFPGYALLGEGAFRVIRDSDIEIEEEAEDLVRFFHTAIKRR
RRGRVIRLRMETGMPAELAELVTEQIDTGTALTSSQATGFLGVCDLEQLVDENRPDLKWP
PFTARFPERIREHGGDCFAAIRDKDIVVHHPYESFEVVIAFLRQAAQDPDVVAIKQTLYR
AGKQSAIIRALIDAAEAGKSVTAVVELKARFDEEQNIMWAAQLERAGVQVVYGFIDWKTH
AKISMVVRRENGQFRTYCHFGTGNYHPITARIYTDLSFFTADPVIGRDAAQVFNYITGYV
EPQHLGAVTISPHGLRETLANMIDAEIDHVRAGRPGTIWAKMNSLVDPAIIEKLYRASAA
GVQIDLIVRGICCLRPGVPGLSDNIRVKSVIGRFLEHSRILCFGDGHALPSNEAKVFISS
ADWMPRNFDRRVEYMLPITNETVHEQILGQVMVANLIDTEQSWTLNADGSYTRVTNAGGK
PFNLHRYFMTNPSLSGRGAALRKSEGVPRLKLRRGGVS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcagaacagccccaaacccaaagccttgccgaagccgaggcgcgtcttgtc
gcggccgaggcgctggtccccgccacggcggagagcatcgcatcggccgccgccgacacc
caggcgcgccagaagtcggaggccgcggtcgagccggtggcgccgcgccagcgctatttc
aaccgcgagctttcgtggctggccttcaacggccgggtgctggacgaagcctgcaacccc
gcccatccgctgctcgagcggctgcgcttcctctccatctccggcaacaatctcgacgaa
ttcttcatggtccgagtcgccggcctgcgcggccagcagatcaacggcgtcgagcagctc
tccgccgacgggctgacgccgggccagcagcttgccgccatcgtcgaaagcgcggaccag
ctgatgctgcgccagcaggacgtgctcaatgcgctgcgcgaggaactcgccgcgcatgat
ttccatatcctcggccagaacgacgtgccggacgagcaggccgagtggctggagcagcat
ttccgcgatcaggtcctgcccgtgctcacgccccaggcgctggatcccgcccatcccttt
cccttcatccccaataaggggttcagcctcgttttcgatctgaagcggctggccgatggc
gagccgatccgcgagctgctgatgatcccgccgacgctgccgcgcttcattcgcctgccg
ggcgagcgcgcccgctatatcgcggtggaggcggtgatccggcgcttttcggggctgctc
ttcccgggctatgcgctgctcggcgagggcgccttccgcgtcatccgcgacagcgatatc
gagatcgaggaagaggcggaggatctggtccgcttcttccatacggcgatcaagcggcgc
cggcgcggccgcgtgatccgcctgcgcatggaaacgggcatgccggccgagctggccgag
ctggtgaccgagcagatcgacacgggcaccgcgctcacctcgtcccaggccaccggcttt
ctcggcgtctgcgatctggagcagctggtcgacgagaaccggcccgatctgaaatggccg
ccctttacggcgcgctttccggagcggatccgcgaacatggcggcgattgcttcgccgcg
atccgcgacaaggatatcgtcgtccaccatccctatgaaagtttcgaggtggtgatcgcc
tttctgcgccaggcggcgcaggatccggacgtggtggcgatcaagcagacgctgtaccgc
gccggcaagcaatcggcgatcatccgcgcgctgatcgacgccgccgaggcgggcaagtcg
gtcaccgccgtggtcgagctcaaggcgcggttcgacgaggaacagaatatcatgtgggcc
gcccagctggagcgggccggcgtgcaggtggtgtacggcttcatcgactggaaaacgcac
gccaagatttcgatggtcgtgcgccgcgagaatggccagttccgcacctactgccacttc
ggcacgggcaattaccacccgatcacggcgcgcatctataccgatctgagcttcttcacc
gccgatcccgtgatcgggcgcgatgcggcgcaggtgttcaactatatcaccggctatgtc
gagccgcagcatctcggcgcggtcaccatctcgccgcacggcctgcgcgagacgctggcc
aatatgatcgatgccgagatcgaccatgtccgcgccggccgccccggcaccatctgggcg
aagatgaattcgctcgtcgatcccgcgatcatcgagaaactgtatcgcgcctcggcggcg
ggggtgcagatcgatctgatcgtgcgcggcatctgctgcctgcggccgggggtgccgggg
ctgagcgacaatatccgcgtcaaatcggtgatcggtcgcttcctcgagcatagccgcatc
ctctgcttcggcgacggccacgccctgccgagcaacgaggccaaggtgttcatctcctcg
gccgactggatgccgcgcaatttcgatcggcgggtggaatatatgctgccgatcaccaac
gagacggtgcacgagcagattctcggccaggtgatggtcgccaatctgatcgataccgag
cagagctggacgctcaacgccgatggcagctacacccgcgtcaccaacgcgggcggcaag
ccgttcaacctgcatcgctatttcatgacgaacccgtcgctgtccgggcgcggcgcggcc
ttgcgcaagtccgagggcgtgccccggctcaaattgcggcgcggcggcgtatcctga
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